Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 523 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  150 bits (379), Expect = 1e-40
 Identities = 125/530 (23%), Positives = 247/530 (46%), Gaps = 51/530 (9%)

Query: 1   MLLLEVKNVSKSYGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGM--EGYEPT 58
           M L+E++++S ++    V++N+S ++  G+ + ++G SG+GKSV  H +  +  E    T
Sbjct: 1   MNLIEIRDLSVAFSGQTVVRNLSLDVRPGECLALVGESGSGKSVTAHSILQLLPEAGTET 60

Query: 59  SGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQR 118
           +G I Y                +G          A ++     N I    ++ +   L  
Sbjct: 61  TGSIQY-----------RGQELIGAS--------AATLQKLRGNRIAMIFQEPMT-SLNP 100

Query: 119 TFALYGEKTVAENIMEALTAAGYEGKDATEWALNLIKMV---KLEHRVAHISRDLSGGEK 175
             ++  EK + E +   L   G  GK A    L L+ +V   K + R+      LSGG++
Sbjct: 101 LHSI--EKQIGETL---LLHKGLGGKAAQARILELLDLVGIQKPQERLKAYPHQLSGGQR 155

Query: 176 QRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEE 235
           QRV++A  +A  P + +ADEPT  LD    + +   L     +  +++++ SH   ++  
Sbjct: 156 QRVMIAMALACEPELLIADEPTTALDVTVQRKILLLLKSLQKRLGMSLLLISHDLNLVRS 215

Query: 236 LCQKAIWLDKGEM-------RLVGESKHVVEEFMKTVTSMKEFEKVEVKDELLKLENVEK 288
           + Q+   +  GE+        L    +H     +       +    + ++ +L+++++  
Sbjct: 216 IAQRVCVMRAGEIVEQADCQTLFNAPQHPYSRLLLDAEPDADALCSDERETVLQVDDLTV 275

Query: 289 RY-----VSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGNYE 343
           ++     +   +  ++AVDGI +S+   +  G+VG SG+GK+TL + I  ++  S G+  
Sbjct: 276 QFRLGGGLFRRKTYLRAVDGISLSVQRGKTLGIVGESGSGKSTLGQAILRLL-DSTGSIR 334

Query: 344 FRLADEWVDMTKVGPLYRGRAKRYIGMLFQEYSLYPHRTILYNLTESIGLEMPGEFAKMK 403
           F+   E +D      +   R +  +       SL P  T+   ++E + +  P   A   
Sbjct: 335 FQ--GEALDPLNNQQMRPWRKQMQVVFQDPYGSLSPRMTVEQIISEGLEVHAPCSLADRD 392

Query: 404 AE--HTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTGTMDP 461
           A+    L  VG           ++P E S G++ R+A+A+ L+ +P L+LLDEPT  +D 
Sbjct: 393 AQVIQVLKDVGLDPASR----HRYPHEFSGGQRQRIAIARALVLKPALMLLDEPTSALDR 448

Query: 462 ITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTG 511
             + QV   +++ + +   TY+ +SHD+  V  +     +++ G++++ G
Sbjct: 449 TVQKQVVALLRELQDKYGLTYLFISHDLAVVRAMAHDMIVIKDGQVVERG 498



 Score = 62.8 bits (151), Expect = 3e-14
 Identities = 60/244 (24%), Positives = 105/244 (43%), Gaps = 40/244 (16%)

Query: 22  VSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSGQIIYHVAYCPHCENVEAPSQV 81
           +S  +  G  +G++G SG+GKS L              GQ I  +        +++   +
Sbjct: 296 ISLSVQRGKTLGIVGESGSGKSTL--------------GQAILRL--------LDSTGSI 333

Query: 82  GKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTF-ALYGEKTVAENIMEALTA-A 139
                    +  +++D  NN ++    +K++ ++ Q  + +L    TV + I E L   A
Sbjct: 334 --------RFQGEALDPLNNQQMR-PWRKQMQVVFQDPYGSLSPRMTVEQIISEGLEVHA 384

Query: 140 GYEGKDATEWALNLIKMVKLE----HRVAHISRDLSGGEKQRVVLARQIAKNPVIFLADE 195
                D     + ++K V L+    HR  H   + SGG++QR+ +AR +   P + L DE
Sbjct: 385 PCSLADRDAQVIQVLKDVGLDPASRHRYPH---EFSGGQRQRIAIARALVLKPALMLLDE 441

Query: 196 PTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKAIWLDKGEMRLVGESK 255
           PT  LD    K V   L E   K+ +  +  SH   V+  +    I +  G++   G S 
Sbjct: 442 PTSALDRTVQKQVVALLRELQDKYGLTYLFISHDLAVVRAMAHDMIVIKDGQVVERGASH 501

Query: 256 HVVE 259
            V +
Sbjct: 502 AVFD 505