Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 556 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  144 bits (363), Expect = 9e-39
 Identities = 131/546 (23%), Positives = 244/546 (44%), Gaps = 71/546 (13%)

Query: 1   MLLLEVKNVSKSYGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEG--YEPT 58
           ++ +E   ++   G  E+++NVSF++  G+++G++G SG+GK+     + G+       T
Sbjct: 11  LVSVEGLTLAVGMGGREIVRNVSFDIAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVRT 70

Query: 59  SGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQR 118
           +G+I++                     E E    AK        E+  A   ++ ++ Q 
Sbjct: 71  AGRILF---------------------EGEDLTQAKPARL---RELRGA---RVGMVFQE 103

Query: 119 TF-ALYGEKTVAENIMEALTAAGYEGKDAT--EWALNLIKMVKLEHRVAHIS---RDLSG 172
              +L    T+ + ++EAL     +   A   E  L+++  V +      +     + SG
Sbjct: 104 PMTSLNPSMTIGKQLVEALALHRRDLSPAARRERILDMLARVGIRDPKGALDAWPHEFSG 163

Query: 173 GEKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEV 232
           G +QR++LA  +   P + +ADEPT  LD    + V   +     +H  A+++ SH   +
Sbjct: 164 GMRQRMMLASVMLLEPALLIADEPTTALDAVVQRDVLELMVGLTREHRTAVLMISHDLPM 223

Query: 233 IEELCQKAIWLDKGEMRLVGESKHVVE--------EFMKTVTSMKEFEKVEVKDELLKLE 284
           +    Q+ + +  GE+   G +  ++E        E ++ +       +V  +  ++++ 
Sbjct: 224 VARFTQRMVVMRHGEVMETGRTDDMLEQPRHAYTRELLQAMPHRLPARQVPDEAPVVEVR 283

Query: 285 NVEKRYVSVDRGIVK-----AVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSK 339
           N+   Y    R   K     A+ GID+ +  +E+  +VG SG+GKTTL + IA ++ PS 
Sbjct: 284 NLVVDYAGHRRLFAKTVPKRALHGIDLVVRPREVVAVVGGSGSGKTTLGRTIAGLLQPSG 343

Query: 340 GNYEFRLADEWVDMTKVGPLYRGRA-----KRYIGMLFQE--YSLYPHRTILYNLTESIG 392
           G   FR            P+ R  A     +    M+FQ+   SL P  TI   + E + 
Sbjct: 344 GEIMFRGR----------PILRSDAGWSDYRLQCQMVFQDPYASLDPRMTIGQLVGEGLR 393

Query: 393 LE--MPGEFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLI 450
           L   M       + +  L  VG           ++  ELS G++ RVA+A+ ++R P  +
Sbjct: 394 LVKGMSTADRARRVQEVLEEVGL----GTGFAPRYAHELSGGQRQRVAIARAIVRRPAFV 449

Query: 451 LLDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKT 510
           + DEP   +D   R QV     + +     + + +SHD+  V  V DR  +++ G+I++ 
Sbjct: 450 IADEPVSALDVTVRAQVLALFAELQKRHGFSCLFISHDLGVVEQVADRVVVMQDGRIVEQ 509

Query: 511 GKPDEI 516
           G  D +
Sbjct: 510 GSRDTV 515



 Score =  101 bits (251), Expect = 8e-26
 Identities = 74/243 (30%), Positives = 121/243 (49%), Gaps = 10/243 (4%)

Query: 283 LENVEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGNY 342
           L +VE   ++V  G  + V  +   I   E+ G+VG SG+GKT  ++ I  + PP     
Sbjct: 11  LVSVEGLTLAVGMGGREIVRNVSFDIAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVRT 70

Query: 343 EFRLADEWVDMTKVGP--LYRGRAKRYIGMLFQE--YSLYPHRTILYNLTESIGLEMPGE 398
             R+  E  D+T+  P  L   R  R +GM+FQE   SL P  TI   L E++ L     
Sbjct: 71  AGRILFEGEDLTQAKPARLRELRGAR-VGMVFQEPMTSLNPSMTIGKQLVEALALHRRDL 129

Query: 399 FAKMKAEHTL---VSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEP 455
               + E  L     VG    + +  L+  P E S G + R+ LA V++ EP L++ DEP
Sbjct: 130 SPAARRERILDMLARVGI--RDPKGALDAWPHEFSGGMRQRMMLASVMLLEPALLIADEP 187

Query: 456 TGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDE 515
           T  +D + +  V E +     E     +++SHD+  V     R  ++R G++++TG+ D+
Sbjct: 188 TTALDAVVQRDVLELMVGLTREHRTAVLMISHDLPMVARFTQRMVVMRHGEVMETGRTDD 247

Query: 516 IVK 518
           +++
Sbjct: 248 MLE 250