Pairwise Alignments
Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2
Subject, 539 a.a., ABC transporter, ATP-binding protein from Pseudomonas putida KT2440
Score = 145 bits (365), Expect = 5e-39
Identities = 137/538 (25%), Positives = 251/538 (46%), Gaps = 66/538 (12%)
Query: 3 LLEVKNVSKSYG----DTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPT 58
L+EV+++S SY ++ L+ +SF L +G+ + V+G SG+GKS L + L G+ P
Sbjct: 6 LIEVRDLSVSYSFAGQRSQALRQLSFSLVQGETLAVVGESGSGKSTLANALLGLL---PG 62
Query: 59 SGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQR 118
+ +I + + +A + ++ T I ++ Q
Sbjct: 63 NARIDQGQLWVDGVDMAQASERARRQLRGRT----------------------IGLVPQD 100
Query: 119 TF-ALYGEKTVAENIMEALTAAG---YEGKDATEWALNLIKMVKLEH---RVAHISRDLS 171
+L + + + I EAL A Y G++A L L+ V L+ R +LS
Sbjct: 101 PMVSLNPTQRIGQQIAEALQLARGRRYPGQEAK--VLALLDQVGLDEPALRARQYPHELS 158
Query: 172 GGEKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPE 231
GG +QRV++A +A P + +ADEPT LD + + + L V + I+++I +H
Sbjct: 159 GGMRQRVLIAIALAGEPRLIIADEPTSALDVTVQRRILDHLQLLVAERGISLLIITHDLG 218
Query: 232 VIEELCQKAIWLDKGEMRLVGESKHVVEEFMKTVTSM-----------KEFEKVEVKDEL 280
+ + + + + +GE G + ++ + T + + L
Sbjct: 219 MACDRADRLLVMKQGEQVEHGSPRQILWGARQPYTRALLDAAPAFVPRRRPAAPRGQTPL 278
Query: 281 LKLENVEKRYVSVDRGI-VKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSK 339
L+L +V KR+ + A+ + + ++ + +VG SG+GK+T +I + PS+
Sbjct: 279 LRLSHVGKRFELPGKNEHYTALHDLSLELHAGQTLAIVGESGSGKSTALRIALGLEKPSQ 338
Query: 340 GNYEFRLAD-EWVDMTKVGPLYRGRAKRYIGMLFQE--YSLYPHRTILYNLTE---SIGL 393
G F D ++ PL +R I ++ Q +L P T+ ++ E S GL
Sbjct: 339 GQVVFAGEDVTGYTWSQFRPL-----RRRIQLVQQNPFAALDPRFTVFDSVVEPLVSFGL 393
Query: 394 EMPGEFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLD 453
+ GE + KA + V + L++ P ELS G++ RVA+A+ L EP ++LLD
Sbjct: 394 -LRGEALERKARELITRVQLPVQ----FLDRLPRELSGGQRQRVAIARALALEPEVLLLD 448
Query: 454 EPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTG 511
EP +D + Q+ + + + EL YV+VSHD+ V ++ D+ ++R G++++ G
Sbjct: 449 EPVSALDVSVQAQILALLDELQRELGMAYVLVSHDLAVVASMADQVLVLRRGQVVEQG 506
Score = 90.1 bits (222), Expect = 2e-22
Identities = 65/226 (28%), Positives = 119/226 (52%), Gaps = 11/226 (4%)
Query: 299 KAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGNYEFRLADEWVDMTKVGP 358
+A+ + S+ + E +VG SG+GK+TL+ + ++P + + +L + VDM +
Sbjct: 24 QALRQLSFSLVQGETLAVVGESGSGKSTLANALLGLLPGNARIDQGQLWVDGVDMAQASE 83
Query: 359 LYRGRAK-RYIGMLFQE--YSLYPHRTILYNLTESI----GLEMPGEFAKMKAEHTLVSV 411
R + + R IG++ Q+ SL P + I + E++ G PG+ AK+ A L V
Sbjct: 84 RARRQLRGRTIGLVPQDPMVSLNPTQRIGQQIAEALQLARGRRYPGQEAKVLA--LLDQV 141
Query: 412 GFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTGTMDPITRNQVAESI 471
G E ++P ELS G + RV +A L EP LI+ DEPT +D + ++ + +
Sbjct: 142 GLDEPALR--ARQYPHELSGGMRQRVLIAIALAGEPRLIIADEPTSALDVTVQRRILDHL 199
Query: 472 QKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEIV 517
Q +E + +I++HD+ + DR +++ G+ ++ G P +I+
Sbjct: 200 QLLVAERGISLLIITHDLGMACDRADRLLVMKQGEQVEHGSPRQIL 245
Score = 83.2 bits (204), Expect = 2e-20
Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 39/273 (14%)
Query: 3 LLEVKNVSKSY---GDTE---VLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYE 56
LL + +V K + G E L ++S EL+ G + ++G SG+GKS L + G+E +
Sbjct: 278 LLRLSHVGKRFELPGKNEHYTALHDLSLELHAGQTLAIVGESGSGKSTALRIALGLE--K 335
Query: 57 PTSGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIML 116
P+ GQ+++ E T Y W+ L+++I ++
Sbjct: 336 PSQGQVVF-------------------AGEDVTGYT------WSQFR---PLRRRIQLVQ 367
Query: 117 QRTFALYGEK-TVAENIMEALTAAGYEGKDATEW-ALNLIKMVKLEHR-VAHISRDLSGG 173
Q FA + TV ++++E L + G +A E A LI V+L + + + R+LSGG
Sbjct: 368 QNPFAALDPRFTVFDSVVEPLVSFGLLRGEALERKARELITRVQLPVQFLDRLPRELSGG 427
Query: 174 EKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVI 233
++QRV +AR +A P + L DEP LD + L E + +A V+ SH V+
Sbjct: 428 QRQRVAIARALALEPEVLLLDEPVSALDVSVQAQILALLDELQRELGMAYVLVSHDLAVV 487
Query: 234 EELCQKAIWLDKGEMRLVGESKHVVEEFMKTVT 266
+ + + L +G++ G + V+ + T
Sbjct: 488 ASMADQVLVLRRGQVVEQGPALQVLSKSASAYT 520