Pairwise Alignments
Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2
Subject, 537 a.a., ABC transporter ATP-binding protein from Pseudomonas fluorescens SBW25
Score = 164 bits (416), Expect = 6e-45
Identities = 139/537 (25%), Positives = 253/537 (47%), Gaps = 63/537 (11%)
Query: 3 LLEVKNVSKSY--GD--TEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPT 58
L+E++++S + GD V+ NVSF++ G+ + ++G SG+GKSV H + +
Sbjct: 6 LIEIRDLSVEFVTGDHHQRVVNNVSFDIKRGETIALVGESGSGKSVTAHSILRL------ 59
Query: 59 SGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQR 118
P + + Y + + I + +IA++ Q
Sbjct: 60 ------------------LPYPLARHPSGTINYAGQDLLTLKEKTIRHIRGNRIAMIFQE 101
Query: 119 TF-ALYGEKTVAENIMEALTA-AGYEGKDATEWALNLIKMVKLEH---RVAHISRDLSGG 173
+L + + I E L G GK AT+ L L+++V + R+ + +LSGG
Sbjct: 102 PMTSLNPLHNIEKQINEVLGLHKGLTGKVATQRTLELLELVGIPEPHKRLKALPHELSGG 161
Query: 174 EKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVI 233
++QRV++A +A P + +ADEPT LD + L E + +A+++ SH ++
Sbjct: 162 QRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLV 221
Query: 234 EELCQKAIWLDKG--------EMRLVGESKHVVEEFMKTVTSMKEFEKVEVKDELLKLEN 285
+ + + KG E +E + S V + LL++++
Sbjct: 222 RRIAHRVCVMQKGCIVEQADCETLFQSPQHPYTQELLAAEPSGGPATNV-IGPPLLEVDD 280
Query: 286 ------VEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSK 339
++K ++ VKAVDGI+ S+ + + G+VG SG+GK+TL I +I SK
Sbjct: 281 LKVWFPIKKGFLRTTVDYVKAVDGINFSLPQGQTLGIVGESGSGKSTLGLAILRLIG-SK 339
Query: 340 GNYEFRLAD-EWVDMTKVGPLYRGRAKRYIGMLFQEY--SLYPHRTILYNLTESIGLEMP 396
G F + + +V PL +R + ++FQ+ SL P + + E + +
Sbjct: 340 GGIRFEGQQLDRLTQQQVRPL-----RREMQVVFQDPFGSLSPRMCVSEIVGEGLRIHKM 394
Query: 397 GEFAKMKAE--HTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDE 454
G A+ +A L VG E ++P E S G++ R+A+A+ L+ +P LILLDE
Sbjct: 395 GTPAEQEAAIIAALKEVGLDPESRH----RYPHEFSGGQRQRIAIARALVLKPRLILLDE 450
Query: 455 PTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTG 511
PT +D + QV E ++ +++ + TY+ +SHD+ V + + +V+ G++++ G
Sbjct: 451 PTSALDRTVQRQVVELLRSLQAKYNLTYLFISHDLAVVKALSHQLMVVKHGQVVEQG 507
Score = 89.0 bits (219), Expect = 4e-22
Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 17/243 (6%)
Query: 277 KDELLKLENVEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIP 336
+D L+++ ++ +V+ D + V+ + I E LVG SG+GK+ + I ++P
Sbjct: 3 QDNLIEIRDLSVEFVTGDHH-QRVVNNVSFDIKRGETIALVGESGSGKSVTAHSILRLLP 61
Query: 337 ------PSKGNYEFRLADEWVDMTKVGPLYRGRAKRYIGMLFQE--YSLYPHRTILYNLT 388
PS G + D K RG I M+FQE SL P I +
Sbjct: 62 YPLARHPS-GTINYAGQDLLTLKEKTIRHIRGNR---IAMIFQEPMTSLNPLHNIEKQIN 117
Query: 389 ESIGLE--MPGEFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIRE 446
E +GL + G+ A + L VG E L+ P ELS G++ RV +A L E
Sbjct: 118 EVLGLHKGLTGKVATQRTLELLELVGI--PEPHKRLKALPHELSGGQRQRVMIAMALANE 175
Query: 447 PHLILLDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGK 506
P L++ DEPT +D + ++ E +++ ++ L +++SHD++ V + R +++ G
Sbjct: 176 PELLIADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQKGC 235
Query: 507 IIK 509
I++
Sbjct: 236 IVE 238
Score = 58.5 bits (140), Expect = 6e-13
Identities = 56/245 (22%), Positives = 103/245 (42%), Gaps = 42/245 (17%)
Query: 17 EVLKNVSFELNEGDVMGVLGRSGAGKSVL-LHMLRGMEGYEPTSGQIIYHVAYCPHCENV 75
+ + ++F L +G +G++G SG+GKS L L +LR
Sbjct: 300 KAVDGINFSLPQGQTLGIVGESGSGKSTLGLAILR------------------------- 334
Query: 76 EAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTFALYGEKTVAENIMEA 135
+G K E + +D ++ L++++ ++ Q F + I+
Sbjct: 335 ----LIGSKGGIRFE--GQQLDRLTQQQVR-PLRREMQVVFQDPFGSLSPRMCVSEIVGE 387
Query: 136 LTAAGYEGKDATEWA--LNLIKMVKLE----HRVAHISRDLSGGEKQRVVLARQIAKNPV 189
G A + A + +K V L+ HR H + SGG++QR+ +AR + P
Sbjct: 388 GLRIHKMGTPAEQEAAIIAALKEVGLDPESRHRYPH---EFSGGQRQRIAIARALVLKPR 444
Query: 190 IFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKAIWLDKGEMR 249
+ L DEPT LD + V L K+N+ + SH V++ L + + + G++
Sbjct: 445 LILLDEPTSALDRTVQRQVVELLRSLQAKYNLTYLFISHDLAVVKALSHQLMVVKHGQVV 504
Query: 250 LVGES 254
G++
Sbjct: 505 EQGDA 509