Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 519 a.a., dipeptide ABC transporter ATP-binding protein from Paraburkholderia sabiae LMG 24235

 Score =  144 bits (364), Expect = 6e-39
 Identities = 135/535 (25%), Positives = 242/535 (45%), Gaps = 67/535 (12%)

Query: 13  YGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSGQIIYHVAYCPHC 72
           +G+T  + +VS  +  G+ + ++G SG+GKSV    +  +     TSG + +        
Sbjct: 2   FGNTVAVDDVSLAIGRGERVALVGESGSGKSVTALSILRLLNDAQTSGAVRFD------- 54

Query: 73  ENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTF-ALYGEKTVAEN 131
                    G+    ++E            E+       IA++ Q    AL    T+ E 
Sbjct: 55  ---------GEDLLMKSE-----------REMRGLRGSDIAMIFQEPMTALNPLYTIGEQ 94

Query: 132 IMEALTAA-GYEGKDATEWALNLIKMVKLEH---RVAHISRDLSGGEKQRVVLARQIAKN 187
           I E +    G    +A + A+ L++   +     RV      LSGG++QR ++A  +A  
Sbjct: 95  IAETIVMHDGVSAGEARKRAVALLERTGITEPGKRVNSYPHQLSGGQRQRAMIAMALACR 154

Query: 188 PVIFLADEPTGTLD----PKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKAIWL 243
           P + LADEPT  LD     +  + +     E   K  +A+++ +H   ++    Q+   +
Sbjct: 155 PRLLLADEPTTALDVTIRAQIVELLLELQREEAEKRGMAVLLITHDLNLVRHFAQRVAVM 214

Query: 244 DKGEMRLVGESKHVVEEFMKTVTS---MKEFEKVEVKDELLKLENVEKRYVSVD------ 294
           +KG +   G  + + E      T        E+  V    +    ++ R VSVD      
Sbjct: 215 EKGVLVESGPVETLFESPQHPYTQRLLQSRPERAVVPVLPIAPVLLDARDVSVDFRTKLP 274

Query: 295 -------RGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGNYEFRLA 347
                   G  +AV    VS+ + E  G+VG SG+GK+TL+  +  +   S G  EF+  
Sbjct: 275 GFSGWFRSGHFRAVADATVSVRQGETLGIVGESGSGKSTLAMALLGLQKTSHGAIEFQ-- 332

Query: 348 DEWVDMTKVGPLYRGRAKRYIG----MLFQE--YSLYPHRTILYNLTESIGLEMPGEFAK 401
                  +    YRGR +  +     ++FQ+   SL P +TI   + E + L  P E A 
Sbjct: 333 ------GRALGSYRGREQTALRSNMQVVFQDPFSSLSPRQTIERIVGEGLALHKP-ELAP 385

Query: 402 MKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTGTMDP 461
                 ++SV          L+++P E S G++ R+A+A+ L+ EP +++LDEPT  +D 
Sbjct: 386 DARRDKVISVLREVGIDRTALQRYPHEFSGGQRQRIAIARALVLEPRILILDEPTSALDV 445

Query: 462 ITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEI 516
             + QV + +   + + +  +V +SHD+  +  +  R A+++ G+I++TG+ D+I
Sbjct: 446 SIQQQVLKLLAGLQRKYNLGFVFISHDLAVIGAMAHRVAVMQNGEIVETGEVDQI 500



 Score = 67.0 bits (162), Expect = 2e-15
 Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 34/251 (13%)

Query: 14  GDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSGQIIYHVAYCPHCE 73
           G    + + +  + +G+ +G++G SG+GKS L   L G++                    
Sbjct: 283 GHFRAVADATVSVRQGETLGIVGESGSGKSTLAMALLGLQ-------------------- 322

Query: 74  NVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTFALYGEKTVAENIM 133
                    K      E+  +++  +   E T AL+  + ++ Q  F+    +   E I+
Sbjct: 323 ---------KTSHGAIEFQGRALGSYRGREQT-ALRSNMQVVFQDPFSSLSPRQTIERIV 372

Query: 134 -EALTAAGYE-GKDAT-EWALNLIKMVKLEHR-VAHISRDLSGGEKQRVVLARQIAKNPV 189
            E L     E   DA  +  +++++ V ++   +     + SGG++QR+ +AR +   P 
Sbjct: 373 GEGLALHKPELAPDARRDKVISVLREVGIDRTALQRYPHEFSGGQRQRIAIARALVLEPR 432

Query: 190 IFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKAIWLDKGEMR 249
           I + DEPT  LD    + V   L     K+N+  V  SH   VI  +  +   +  GE+ 
Sbjct: 433 ILILDEPTSALDVSIQQQVLKLLAGLQRKYNLGFVFISHDLAVIGAMAHRVAVMQNGEIV 492

Query: 250 LVGESKHVVEE 260
             GE   +  E
Sbjct: 493 ETGEVDQIFAE 503