Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 382 a.a., L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  134 bits (336), Expect = 8e-36
 Identities = 82/254 (32%), Positives = 138/254 (54%), Gaps = 15/254 (5%)

Query: 280 LLKLENVEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSK 339
           ++KLEN+ K++V      +KAVD +++++ E E+  L+G SG GKTT  K+I  +I PS 
Sbjct: 1   MIKLENLTKQFVQKKGQPLKAVDNVNLNVPEGEMCVLLGPSGCGKTTTLKMINRLIAPSS 60

Query: 340 GNYEFRLADEWVDMTKVGPLYRGRAKRYIGMLFQEYSLYPHRTILYNLT---ESIGLEMP 396
           GN      +   DM  V        +R IG + Q+  L+P+ TI  N+T     +G +  
Sbjct: 61  GNILIN-GENTNDMDAV------TLRRNIGYVIQQIGLFPNMTIEENITVVPRMLGWDKA 113

Query: 397 GEFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPT 456
               K +AE  +  V     +A   L ++P E+S G++ R+ + + L  +P ++L+DEP 
Sbjct: 114 R--CKQRAEELMDMVAL---DARKFLHRYPKEMSGGQQQRIGVIRALAADPPVLLMDEPF 168

Query: 457 GTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEI 516
           G +DPI R  +       + +L +T ++VSHD+D  L + DR A+ R G+I++   PDE+
Sbjct: 169 GAVDPINREVIQNQFLDMQRKLKKTVMLVSHDIDEALKLGDRIAVFRQGRIVQCASPDEL 228

Query: 517 VKILSEEEKDEMIG 530
           +   + E     +G
Sbjct: 229 LAKPANEFVGSFVG 242



 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 54/234 (23%), Positives = 108/234 (46%), Gaps = 43/234 (18%)

Query: 3   LLEVKNVSKSYGDTE-----VLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEP 57
           +++++N++K +   +      + NV+  + EG++  +LG SG GK+  L M+  +    P
Sbjct: 1   MIKLENLTKQFVQKKGQPLKAVDNVNLNVPEGEMCVLLGPSGCGKTTTLKMINRL--IAP 58

Query: 58  TSGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEI-TYALKKKIAIML 116
           +SG I+                                ++  N N++    L++ I  ++
Sbjct: 59  SSGNIL--------------------------------INGENTNDMDAVTLRRNIGYVI 86

Query: 117 QRTFALYGEKTVAENIMEALTAAGYEGKDATEWALNLIKMVKLEHR--VAHISRDLSGGE 174
           Q+   L+   T+ ENI       G++     + A  L+ MV L+ R  +    +++SGG+
Sbjct: 87  QQ-IGLFPNMTIEENITVVPRMLGWDKARCKQRAEELMDMVALDARKFLHRYPKEMSGGQ 145

Query: 175 KQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSH 228
           +QR+ + R +A +P + L DEP G +DP   + + N   +   K    +++ SH
Sbjct: 146 QQRIGVIRALAADPPVLLMDEPFGAVDPINREVIQNQFLDMQRKLKKTVMLVSH 199