Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 400 a.a., L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  132 bits (332), Expect = 2e-35
 Identities = 79/259 (30%), Positives = 151/259 (58%), Gaps = 23/259 (8%)

Query: 273 KVEVKDELLKL--ENVEKRYVSVDRGIVK-----------AVDGIDVSINEKEIFGLVGV 319
           K+EVK+ L K+  E+ ++ +  +++G+ K            V    ++I E EIF ++G+
Sbjct: 4   KLEVKN-LYKIFGEHPQRAFKYIEKGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGL 62

Query: 320 SGAGKTTLSKIIAAVIPPSKGNYEFRLADEWVDMTKVGPL-YRGRAKRYIGMLFQEYSLY 378
           SG+GK+T+ +++  +I P++G    ++  + VD+ K+     R   ++ I M+FQ ++L 
Sbjct: 63  SGSGKSTMVRLLNRLIEPTRG----QVLIDGVDIAKISDAELREVRRKKIAMVFQSFALM 118

Query: 379 PHRTILYNLTESIGLEMPGEFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVA 438
           PH T+L N   + G+E+ G  A+ + E  L ++   +   EN    +P ELS G + RV 
Sbjct: 119 PHMTVLDNT--AFGMELAGIAAQERREKALDAL--RQVGLENYAHAYPDELSGGMRQRVG 174

Query: 439 LAQVLIREPHLILLDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDR 498
           LA+ L   P ++L+DE    +DP+ R ++ + + K +++  +T V +SHD+D  + + DR
Sbjct: 175 LARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDR 234

Query: 499 AALVRGGKIIKTGKPDEIV 517
            A+++ G++++ G PDEI+
Sbjct: 235 IAIMQNGEVVQVGTPDEIL 253



 Score = 91.7 bits (226), Expect = 5e-23
 Identities = 70/240 (29%), Positives = 114/240 (47%), Gaps = 30/240 (12%)

Query: 19  LKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSGQIIYHVAYCPHCENVEAP 78
           +K+ S  + EG++  ++G SG+GKS ++ +L  +   EPT GQ++         + V+  
Sbjct: 44  VKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRL--IEPTRGQVLI--------DGVD-- 91

Query: 79  SQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTFALYGEKTVAENIMEALTA 138
                        +AK  D     E+    +KKIA++ Q +FAL    TV +N    +  
Sbjct: 92  -------------IAKISDA----ELREVRRKKIAMVFQ-SFALMPHMTVLDNTAFGMEL 133

Query: 139 AGYEGKDATEWALNLIKMVKLEHRVAHISRDLSGGEKQRVVLARQIAKNPVIFLADEPTG 198
           AG   ++  E AL+ ++ V LE+       +LSGG +QRV LAR +A NP I L DE   
Sbjct: 134 AGIAAQERREKALDALRQVGLENYAHAYPDELSGGMRQRVGLARALAINPDILLMDEAFS 193

Query: 199 TLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKAIWLDKGEMRLVGESKHVV 258
            LDP     + + L +   KH   +V  SH  +    +  +   +  GE+  VG    ++
Sbjct: 194 ALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEIL 253