Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 399 a.a., glycine betaine/L-proline ABC transporter ATP-binding protein ProV from Erwinia tracheiphila SCR3

 Score =  135 bits (341), Expect = 2e-36
 Identities = 85/262 (32%), Positives = 150/262 (57%), Gaps = 29/262 (11%)

Query: 273 KVEVKDELLKL--ENVEKRYVSVDRGIVK-----------AVDGIDVSINEKEIFGLVGV 319
           K+EVK+ L K+  +N E+    +++G+ K            V    ++I E EIF ++G+
Sbjct: 4   KLEVKN-LYKIFGDNPERACRHIEKGVSKEALLEKTGLSLGVKNASLAIEEGEIFVIMGL 62

Query: 320 SGAGKTTLSKIIAAVIPPSKGNYEFRLADEWVDMTKVGPLYRGRAKRY-IGMLFQEYSLY 378
           SG+GK+T+ +++  +I P++G    ++  + VD+ K+      + +R  I M+FQ ++L 
Sbjct: 63  SGSGKSTMVRLLNRLIEPTRG----QVIIDGVDIAKISDAELRQVRRNKISMVFQSFALM 118

Query: 379 PHRTILYNLTESIGLEMPG---EFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKH 435
           PH T+L N   + G+E+ G   +  + KA   L  VG      EN    +P ELS G + 
Sbjct: 119 PHMTVLNNT--AFGMELAGIPLQGRQDKALEALRQVGL-----ENYAHAYPDELSGGMRQ 171

Query: 436 RVALAQVLIREPHLILLDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNV 495
           RV LA+ L  +P ++L+DE    +DP+ R ++ + + K +S   +T V +SHD+D  + +
Sbjct: 172 RVGLARALAIDPDILLMDEAFSALDPLIRTEMQDELLKLQSSHQRTIVFISHDLDEAMRI 231

Query: 496 CDRAALVRGGKIIKTGKPDEIV 517
            DR A+++GG++I+ G PDEI+
Sbjct: 232 GDRIAIMQGGEVIQVGSPDEIL 253



 Score = 82.8 bits (203), Expect = 2e-20
 Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 54/279 (19%)

Query: 4   LEVKNVSKSYGDTEV------------------------LKNVSFELNEGDVMGVLGRSG 39
           LEVKN+ K +GD                           +KN S  + EG++  ++G SG
Sbjct: 5   LEVKNLYKIFGDNPERACRHIEKGVSKEALLEKTGLSLGVKNASLAIEEGEIFVIMGLSG 64

Query: 40  AGKSVLLHMLRGMEGYEPTSGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFW 99
           +GKS ++ +L  +   EPT GQ+I         + V+               +AK  D  
Sbjct: 65  SGKSTMVRLLNRL--IEPTRGQVI--------IDGVD---------------IAKISD-- 97

Query: 100 NNNEITYALKKKIAIMLQRTFALYGEKTVAENIMEALTAAGYEGKDATEWALNLIKMVKL 159
              E+    + KI+++ Q +FAL    TV  N    +  AG   +   + AL  ++ V L
Sbjct: 98  --AELRQVRRNKISMVFQ-SFALMPHMTVLNNTAFGMELAGIPLQGRQDKALEALRQVGL 154

Query: 160 EHRVAHISRDLSGGEKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKH 219
           E+       +LSGG +QRV LAR +A +P I L DE    LDP     + + L +    H
Sbjct: 155 ENYAHAYPDELSGGMRQRVGLARALAIDPDILLMDEAFSALDPLIRTEMQDELLKLQSSH 214

Query: 220 NIAMVITSHWPEVIEELCQKAIWLDKGEMRLVGESKHVV 258
              +V  SH  +    +  +   +  GE+  VG    ++
Sbjct: 215 QRTIVFISHDLDEAMRIGDRIAIMQGGEVIQVGSPDEIL 253