Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 531 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

 Score =  150 bits (378), Expect = 1e-40
 Identities = 130/530 (24%), Positives = 242/530 (45%), Gaps = 52/530 (9%)

Query: 3   LLEVKNVSKSYGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSGQI 62
           LL V+++    G+  +++++SF LN+G+V+G++G SGAGKS              T GQ 
Sbjct: 4   LLRVEHLRVVAGERALVQDISFTLNKGEVLGLIGESGAGKS--------------TIGQA 49

Query: 63  IYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTFAL 122
           I  + +C H   +E+     +  +  ++  A S       ++      +IA + Q   A 
Sbjct: 50  I--LGHCRHGMRIESGHIWFQNDDKHSDLAALS-----ERQLRRVRGARIAYVAQSASAS 102

Query: 123 YGE-KTVAENIMEALTAAGYEGKD-ATEWALNLIKMVKLEHRVAHISR---DLSGGEKQR 177
           +   + + E ++E     G   +  A   A+ L   + L    A   R    +SGG+ QR
Sbjct: 103 FNPAQRIGEQVIETAVRHGVLSRQQAIVRAIELFAQLSLPEPKAFFQRYPHQVSGGQLQR 162

Query: 178 VVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELC 237
            ++A  +   P + + DEPT  LD  T   V NA+ E +    +A +  SH   V+ ++ 
Sbjct: 163 AMIAMAMCAGPDLIIFDEPTTALDVTTQLGVLNAIDEIIRLTGVAALYISHDLAVVAQIS 222

Query: 238 QKAIWLDKGEMRLVGESKHVV----EEFMKTVTSMKEFEKVE---VKDELLKLENVEKRY 290
            + + L  G     G++  ++    E + + +   +   K       D LL + ++   Y
Sbjct: 223 HRIMVLRHGRQVETGDTASLLANPGEAYTRALLQARGEPKAPQPATGDTLLDIRHLGAHY 282

Query: 291 VSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGNYEFRLADEW 350
                     +  + + +       ++G SG+GK+TL + +  ++ P+ G  E RL    
Sbjct: 283 QQQP-----VLQDVSLQLARGRTLAVIGESGSGKSTLGRTLCGLLAPAGG--EIRLNG-- 333

Query: 351 VDMTKVGPLYRGRAK-RYIGMLFQ--EYSLYPHRTILYNLTESIGL--EMPGEFAKMKAE 405
            D        R RA+ + + M+ Q  + +L P   +   +  ++    ++ G   + +  
Sbjct: 334 -DALPPRLAQRNRAQLQSVQMIHQHPDTALNPRLPVGVQIERAMVCLTQLDGATRRARVS 392

Query: 406 HTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTGTMDPITRN 465
             L  VG T E    M  ++P+ LS G+K RV +A+ L  +P LI+ DEPT  +DP+   
Sbjct: 393 DLLHQVGLTPE----MALRYPTALSGGQKQRVCIARALAAQPSLIVCDEPTSALDPLVAR 448

Query: 466 QVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDE 515
           +V   +++ + E    Y+ ++HD+  V  V D  A++R G+I++ G   E
Sbjct: 449 EVLALLRQIQQETGVAYLFITHDLHVVREVADTVAVLRHGRIVRQGPVTE 498



 Score = 69.7 bits (169), Expect = 3e-16
 Identities = 64/249 (25%), Positives = 118/249 (47%), Gaps = 30/249 (12%)

Query: 279 ELLKLENVEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAA----V 334
           ELL++E++  R V+ +R +V+    I  ++N+ E+ GL+G SGAGK+T+ + I       
Sbjct: 3   ELLRVEHL--RVVAGERALVQ---DISFTLNKGEVLGLIGESGAGKSTIGQAILGHCRHG 57

Query: 335 IPPSKGNYEFRLADEWVDMTKVG--PLYRGRAKRYIGMLFQEYSLYPHRTILYNLTESIG 392
           +    G+  F+  D+  D+  +    L R R  R I  + Q  S        +N  + IG
Sbjct: 58  MRIESGHIWFQNDDKHSDLAALSERQLRRVRGAR-IAYVAQSAS------ASFNPAQRIG 110

Query: 393 LE----------MPGEFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQV 442
            +          +  + A ++A      +   E +A    +++P ++S G+  R  +A  
Sbjct: 111 EQVIETAVRHGVLSRQQAIVRAIELFAQLSLPEPKA--FFQRYPHQVSGGQLQRAMIAMA 168

Query: 443 LIREPHLILLDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALV 502
           +   P LI+ DEPT  +D  T+  V  +I +         + +SHD+  V  +  R  ++
Sbjct: 169 MCAGPDLIIFDEPTTALDVTTQLGVLNAIDEIIRLTGVAALYISHDLAVVAQISHRIMVL 228

Query: 503 RGGKIIKTG 511
           R G+ ++TG
Sbjct: 229 RHGRQVETG 237