Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 555 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  162 bits (411), Expect = 2e-44
 Identities = 142/554 (25%), Positives = 257/554 (46%), Gaps = 81/554 (14%)

Query: 3   LLEVKNVSKSY----GDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPT 58
           +++ +N++ ++    G  E +K++SF+L  G+ + ++G SG+GKSV    + G+      
Sbjct: 25  IIDARNIAVTFKVEHGTVEAVKDISFQLYRGETIAIVGESGSGKSVTARTIMGL------ 78

Query: 59  SGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQR 118
                           +   + V K           +V F  ++ + ++ +++ A+   R
Sbjct: 79  ----------------LTKRASVSKSA---------TVRFNGDDILRFSSRQRRALRGNR 113

Query: 119 TFALYGEK--------TVAENIMEALTA-AGYEGKDATEWALNLIKMVKL---EHRVAHI 166
              ++ E         T+   I+EA+   +    K+A   AL+L++ V++   E R+   
Sbjct: 114 ISMIFQEPMSSLNPIYTIGSQIVEAIRVHSRLSRKEAEARALDLLRQVQIPEPEARLKQY 173

Query: 167 SRDLSGGEKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVIT 226
              LSGG++QRV++A  ++ +P + +ADEPT  LD      + N + +   K  +A+V+ 
Sbjct: 174 PHQLSGGQRQRVMIAMALSNDPDVLIADEPTTALDVTVQAQILNLIRDLQKKRGMAVVLI 233

Query: 227 SHWPEVIEELCQKAIWLDKGEMR-------LVGESKH------VVEEFMKTVTSMKEFEK 273
           +H   ++++       +  GEMR       L    +H      +  E   T   + E   
Sbjct: 234 THDLTIVKQFSDYVYVMQHGEMREHNTTERLFAAPQHPYTKRLLASEPRGTAKPLPENSG 293

Query: 274 VEVKDELLKLENVEKRYVSVDRGIVK-------AVDGIDVSINEKEIFGLVGVSGAGKTT 326
           V     LL    V   ++    G+ K       AVD + +++   E  GLVG SG+GKTT
Sbjct: 294 V-----LLTASGVRVSFMMRYGGLFKPELKELIAVDSLGLTLKRHETLGLVGESGSGKTT 348

Query: 327 LSKIIAAVIPPSKGNYEFRLADEWVDMTKVGPLYRGRAKRYIGMLFQEYSLYPHRTILYN 386
             + +  +  P  G   F    E VD      +   R++  I       SL P  TI   
Sbjct: 349 FGQSLLRLNEPVGGEVIFD--GERVDGRSRSEMRPLRSRMQIVFQDPFASLNPRMTIGQI 406

Query: 387 LTESIGLEMPGEFAKMKAEHTLVSVGFTEEEAE---NMLEKHPSELSVGEKHRVALAQVL 443
           + E  GL + G   + KAE  L  V    E A    N+L + P E S G++ R+A+A+ +
Sbjct: 407 IEE--GLIING-LGRTKAER-LERVRDALEAAGMPGNILSRFPHEFSGGQRQRIAIARAV 462

Query: 444 IREPHLILLDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVR 503
             EP  ILLDEPT  +D   + Q+ + ++K + E   +Y+ +SHD+  V  +C R  +++
Sbjct: 463 ALEPEFILLDEPTSALDLSVQAQIIDLLRKLQDERGLSYLFISHDLKVVRALCHRVIVMQ 522

Query: 504 GGKIIKTGKPDEIV 517
           GG+I++ G  ++++
Sbjct: 523 GGRIVEEGPVEDVL 536