Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 341 a.a., spermidine/putrescine ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  131 bits (330), Expect = 3e-35
 Identities = 79/227 (34%), Positives = 127/227 (55%), Gaps = 15/227 (6%)

Query: 291 VSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGNYEFRLADEW 350
           VS+  G   AV  +D+ I + E+  L+G SG GKTT  + IA ++P + G  +     + 
Sbjct: 12  VSLAYGNSIAVKDLDLDIRKGELLALLGPSGCGKTTTMRAIAGLMPVASGRIDL----DG 67

Query: 351 VDMTKVGPLYRGRAKRYIGMLFQEYSLYPHRTILYNLTESIGLE-MPGEFAKMKAEHTLV 409
            D+T+V        KR +G++FQ Y+L+PH T+  N+   + L+ M G+    K    L 
Sbjct: 68  ADITRVAA-----NKRAVGLVFQSYALFPHLTVYENVAFGLKLKGMSGKTLDDKVASGLK 122

Query: 410 SVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTGTMDPITRNQVAE 469
           SVG +     N   + P+ELS G++ RVALA+ ++ EP ++LLDEP   +D   R ++  
Sbjct: 123 SVGLS-----NFASRKPAELSGGQQQRVALARSMVMEPKVLLLDEPLSNLDARLRLEMRT 177

Query: 470 SIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEI 516
            +Q+ + E   T + V+HD    L + DR  +++GGKI + G P+EI
Sbjct: 178 ELQRVQKETGVTMIFVTHDQIEALALADRIVVMKGGKIEQIGTPEEI 224



 Score = 80.1 bits (196), Expect = 1e-19
 Identities = 62/284 (21%), Positives = 120/284 (42%), Gaps = 38/284 (13%)

Query: 4   LEVKNVSKSYGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSGQII 63
           L +  VS +YG++  +K++  ++ +G+++ +LG SG GK+  +  + G+           
Sbjct: 7   LSLNKVSLAYGNSIAVKDLDLDIRKGELLALLGPSGCGKTTTMRAIAGL----------- 55

Query: 64  YHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTFALY 123
                         P   G+            +D    +    A  K+   ++ +++AL+
Sbjct: 56  -------------MPVASGR------------IDLDGADITRVAANKRAVGLVFQSYALF 90

Query: 124 GEKTVAENIMEALTAAGYEGKDATEWALNLIKMVKLEHRVAHISRDLSGGEKQRVVLARQ 183
              TV EN+   L   G  GK   +   + +K V L +  +    +LSGG++QRV LAR 
Sbjct: 91  PHLTVYENVAFGLKLKGMSGKTLDDKVASGLKSVGLSNFASRKPAELSGGQQQRVALARS 150

Query: 184 IAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKAIWL 243
           +   P + L DEP   LD +    +   L     +  + M+  +H       L  + + +
Sbjct: 151 MVMEPKVLLLDEPLSNLDARLRLEMRTELQRVQKETGVTMIFVTHDQIEALALADRIVVM 210

Query: 244 DKGEMRLVGESKHVVEEFMKT-VTSMKEFEKV-EVKDELLKLEN 285
             G++  +G  + +    + + V     FE +  ++D  LK  N
Sbjct: 211 KGGKIEQIGTPEEIYNAPVSSFVADFVGFENIFALEDGALKTAN 254