Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 511 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  150 bits (380), Expect = 8e-41
 Identities = 134/523 (25%), Positives = 246/523 (47%), Gaps = 62/523 (11%)

Query: 19  LKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSGQIIYHVAYCPHCENVEAP 78
           +K +  ++ +G+ + V+G SG+GKS     + G+ G   ++G I     Y  H       
Sbjct: 4   VKGIDIDVKQGETLAVVGESGSGKS---QTMMGIMGLLASNGIIEGSAKYRGH------- 53

Query: 79  SQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTF-ALYGEKTVAENIMEALT 137
                      E +   V     NE+      KI ++ Q    +L     +   I E + 
Sbjct: 54  -----------ELIGLPV-----NELNDIRGAKITMIFQEPMTSLDPLYRIGAQIAEPII 97

Query: 138 A-AGYEGKDATEWALNLIKMVKL---EHRVAHISRDLSGGEKQRVVLARQIAKNPVIFLA 193
              G   + A    L L+K+V +   E R+     +LSGG++QRV++A  +A  P I +A
Sbjct: 98  YHRGGSKRQARARVLELLKLVGIPEPERRIDSYPHELSGGQRQRVMIAMALANEPDILIA 157

Query: 194 DEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKAIWLDKGEMRLVGE 253
           DEPT  LD      + + L     +  +A+V+ +H   V+     +   + +GE+   G 
Sbjct: 158 DEPTTALDVTIQAQILDLLKSLQQRFGMAVVLITHDLGVVRHFANRVAVMRRGEIVETGT 217

Query: 254 SKHVVEEFMKTVTSM-----KEFEKVEVKDE---LLKLENVEKRYVSVDRGIV------K 299
           ++ + E      T M         K  V  E   +L  +NV   Y  +  G +      +
Sbjct: 218 TEDIFERPQADYTKMLLDAEPSGHKPAVGSEAPVVLSGKNVTIDY-KIPGGFLSKSSKFR 276

Query: 300 AVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGNYEFRLAD-EWVDMTKVGP 358
           AVD ++V +++ +  G+VG SG+GK+TL + +  +I  S+G   F   +   +D   + P
Sbjct: 277 AVDSVNVDLHQGQTIGIVGESGSGKSTLGRALLRLIV-SEGRIFFGKTEITGLDRKAMRP 335

Query: 359 LYRGRAKRYIGMLFQEY--SLYPHRTILYNLTESIGL---EMPGEFAKMKAEHTLVSVGF 413
           L     +R++ ++FQ+   SL P +T+   +TE + +   ++       +A   L  VG 
Sbjct: 336 L-----RRHLQLVFQDPYGSLSPRQTVGEIITEGLFVHEQQLSRAERDKRAIEALKEVGL 390

Query: 414 TEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTGTMDPITRNQVAESIQK 473
            +  A N   ++P E S G++ R+A+A+ +I +P +++LDEPT  +D   + QV + ++ 
Sbjct: 391 -DPAARN---RYPHEFSGGQRQRIAIARAIILKPEVVILDEPTSALDRSVQGQVIDLLRD 446

Query: 474 SRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEI 516
            +     +Y+ +SHD+  +  + D   ++R GKI++ G+ D I
Sbjct: 447 LQKAHGLSYIFISHDLSVIKAISDYVIVMRNGKIVEEGETDAI 489



 Score = 89.7 bits (221), Expect = 2e-22
 Identities = 66/226 (29%), Positives = 116/226 (51%), Gaps = 12/226 (5%)

Query: 298 VKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPS---KGNYEFRLADEWVDMT 354
           + AV GID+ + + E   +VG SG+GK+     I  ++  +   +G+ ++R   E + + 
Sbjct: 1   MNAVKGIDIDVKQGETLAVVGESGSGKSQTMMGIMGLLASNGIIEGSAKYR-GHELIGLP 59

Query: 355 KVGPLYRGRAKRYIGMLFQE--YSLYPHRTILYNLTESIGLEMPGEFAKMKAE--HTLVS 410
            V  L   R  + I M+FQE   SL P   I   + E I     G   + +A     L  
Sbjct: 60  -VNELNDIRGAK-ITMIFQEPMTSLDPLYRIGAQIAEPIIYHRGGSKRQARARVLELLKL 117

Query: 411 VGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTGTMDPITRNQVAES 470
           VG  E E    ++ +P ELS G++ RV +A  L  EP +++ DEPT  +D   + Q+ + 
Sbjct: 118 VGIPEPERR--IDSYPHELSGGQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDL 175

Query: 471 IQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEI 516
           ++  +       V+++HD+  V +  +R A++R G+I++TG  ++I
Sbjct: 176 LKSLQQRFGMAVVLITHDLGVVRHFANRVAVMRRGEIVETGTTEDI 221