Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 568 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  160 bits (404), Expect = 2e-43
 Identities = 136/539 (25%), Positives = 251/539 (46%), Gaps = 47/539 (8%)

Query: 3   LLEVKNVSKSY----GDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPT 58
           LLEV+N+   +    G    + ++SF +  G  + V+G SG+GKSV    +         
Sbjct: 7   LLEVRNLVTEFPLRTGVFRAVNDISFSIEPGKTLCVVGESGSGKSVTARSIL-------- 58

Query: 59  SGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQR 118
             QII    Y      + + S +  K +  +  +AK         I       IA++ Q 
Sbjct: 59  --QIIDSPGY------ITSGSIILNKADGSSVDLAKLDP--RGRAIRAVRGADIAMIFQE 108

Query: 119 TFA-LYGEKTVAENIMEALTAAGYEGK-DATEWALNLIKMVKLEHRVAHISR---DLSGG 173
             + L    TV + I E L       K  A   A+ L++ V++ +    + R     SGG
Sbjct: 109 PMSSLSPVHTVGDQITEVLRLHLKMSKAQARAEAIELLRQVEIPNPEKALDRYAFQYSGG 168

Query: 174 EKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVI 233
            +QR ++A  +A  P + +ADEPT  LD  T   + + ++     H +A++  +H   V+
Sbjct: 169 MRQRAMIAMALACKPQLLIADEPTTALDVTTQAEILDLISRLQKAHGMAVLFITHDMGVV 228

Query: 234 EELCQKAIWLDKGEMRLVGESKHVVEEFMKTVTSM------KEFEKVEVKDELLKLEN-- 285
            ++    + +  G ++  G  + +  +     T M      K  +K E++     L+   
Sbjct: 229 AQIADDVLVMHHGVVKEYGTVEQIFHKPQDPYTRMLIGSVLKLEQKAEIRLARPPLDQTA 288

Query: 286 ---VEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGNY 342
              +E + +S+  G +KA+DG+ + +   E  G+VG SG+GKTT+ + I  +  P+ G  
Sbjct: 289 APILEVKDLSMHFGEMKALDGVSIKLLPGETLGIVGESGSGKTTMGRSIMRLYDPTAGEM 348

Query: 343 EFRLAD-EWVDMTKVGPLYRGRAKRYIGMLFQEY--SLYPHRTILYNLTESIGLE--MPG 397
            +R AD   VD++K+       A+R + M+FQ+   SL P  T+   + E + +     G
Sbjct: 349 LYRRADGSVVDLSKIEGKELKAARRELRMVFQDPFGSLNPRMTVAQVIGEPLLVNGIAKG 408

Query: 398 EFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTG 457
           +  + +    +  VG      E    ++P   S G++ R+ +A+ +   P +I+ DE T 
Sbjct: 409 KELEERVCSLMEQVGLDPSGRE----RYPHAFSGGQRQRIGIARAITLRPRIIVADEATS 464

Query: 458 TMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEI 516
            +D   R QV + + K + EL   Y+ +SHD+  +  +CDR  ++  GK+++ G+ +++
Sbjct: 465 ALDVSVRFQVLDLLMKLQDELGLAYIFISHDIGVIRYMCDRVGVMYRGKLVEVGEAEKV 523