Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 544 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  154 bits (390), Expect = 6e-42
 Identities = 142/545 (26%), Positives = 248/545 (45%), Gaps = 74/545 (13%)

Query: 3   LLEVKNVSKSYGDT--EVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGM--EGYEPT 58
           LL V+ +S     +   V+K+VSF++  G++ G++G SG+GK++    L  +       T
Sbjct: 6   LLTVRGLSLEVAGSGHRVVKDVSFDIAPGEIFGIVGESGSGKTLATRALISLLPPAIAVT 65

Query: 59  SGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQR 118
            G +IY                             + V      E+      +I ++ Q 
Sbjct: 66  GGSVIYK---------------------------GQDVMSLPARELRRLRGAEIGVVFQE 98

Query: 119 TF-ALYGEKTVAENIMEALTA-AGYEGKDATEWALNLIKMVKL---EHRVAHISRDLSGG 173
              +L    T+   + E L        ++  E  L +++ V +   E  +A    + SGG
Sbjct: 99  PMTSLNPSMTIGRQLEEGLILHTKLSPEERREKILEMLRRVGIRDPEGALAAYPHEFSGG 158

Query: 174 EKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVI 233
            +QR++LA  +   P + +ADEPT  LD    + V   + E       A+++ SH   ++
Sbjct: 159 MRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELMVELTRAEGTAVLLISHDLPMV 218

Query: 234 EELCQKAIWLDKGEMRLVGESKHVVEE----FMKTVTSMKEFEKVEVKDELLKLENVEKR 289
                + + ++KG +   G ++ +++     + K + S   F       +  K   V  R
Sbjct: 219 ARYTSRIVVMEKGAIVEQGRTEDLLDAPRHPYTKKLLSSLPFRGEPRSIDTSKAPMVSAR 278

Query: 290 YVSVD----RGIVK------AVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSK 339
            + VD    + ++K      A+ G+ + I+E E+  LVG SG+GKTTL + IA ++  S+
Sbjct: 279 GIVVDYAGRKSLLKKAKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVKESE 338

Query: 340 GNYEFR---LADEWVDMTKVGPLYRGRAKRYIGMLFQE--YSLYPHRTILYNLTESIGLE 394
           G+  F+     ++W D       YR   +    M+FQ+   SL P  TI   + E++ L 
Sbjct: 339 GHIRFQGRERNEDWND-------YRLNCQ----MVFQDPYSSLDPRMTIQALVEEALRL- 386

Query: 395 MPG--EFAKMK-AEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLIL 451
           +PG  + AK K A  TL  VG   + A     ++P ELS G++ RVA+A+ + R P  ++
Sbjct: 387 VPGLDQAAKRKRALETLEEVGLGVDYAG----RYPHELSGGQRQRVAIARAIARRPRFLI 442

Query: 452 LDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTG 511
            DEP   +D   R QV +     +     + + +SHD+  V  V DR  +++ G+II+ G
Sbjct: 443 ADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEG 502

Query: 512 KPDEI 516
             D I
Sbjct: 503 DRDTI 507



 Score = 88.2 bits (217), Expect = 7e-22
 Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 13/227 (5%)

Query: 299 KAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPS----KGNYEFRLADEWVDMT 354
           + V  +   I   EIFG+VG SG+GKT  ++ + +++PP+     G+  ++  D  V   
Sbjct: 22  RVVKDVSFDIAPGEIFGIVGESGSGKTLATRALISLLPPAIAVTGGSVIYKGQD--VMSL 79

Query: 355 KVGPLYRGRAKRYIGMLFQE--YSLYPHRTILYNLTESIGL--EMPGEFAKMKAEHTLVS 410
               L R R    IG++FQE   SL P  TI   L E + L  ++  E  + K    L  
Sbjct: 80  PARELRRLRGAE-IGVVFQEPMTSLNPSMTIGRQLEEGLILHTKLSPEERREKILEMLRR 138

Query: 411 VGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTGTMDPITRNQVAES 470
           VG    + E  L  +P E S G + R+ LA V++ +P L++ DEPT  +D + +  V E 
Sbjct: 139 VGI--RDPEGALAAYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMEL 196

Query: 471 IQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEIV 517
           + +         +++SHD+  V     R  ++  G I++ G+ ++++
Sbjct: 197 MVELTRAEGTAVLLISHDLPMVARYTSRIVVMEKGAIVEQGRTEDLL 243