Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 548 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  153 bits (387), Expect = 1e-41
 Identities = 132/545 (24%), Positives = 255/545 (46%), Gaps = 62/545 (11%)

Query: 2   LLLEVKNVS----KSYGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEP 57
           ++L V+N++    +    +  +K++SF+L+ G+++ ++G SG+GKSV    + G+     
Sbjct: 10  VVLSVRNLTVDLPRGMERSHAVKDISFDLHAGEILCIIGESGSGKSVTASTIMGLL---- 65

Query: 58  TSGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQ 117
                                S V      E ++    +      +I     + ++I+ Q
Sbjct: 66  ---------------------SPVITVSSGEIQFKGMDILAAKEEKIRPLRGQAVSIIFQ 104

Query: 118 RTF-ALYGEKTVAENIMEALTAAGYEGKDATEW-ALNLIKMVKLEH----RVAHISRDLS 171
               AL    TV + + E L A G   ++      L L++ V L      R+ +  R LS
Sbjct: 105 DPLSALNPLMTVGDQVAEVLEAHGVGTRETRNAKVLELLEEVGLPDPLLMRLQYPFR-LS 163

Query: 172 GGEKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPE 231
           GG++QRV++A  +A +P + +ADEPT  LD  T   +   + +   + N++++  +H   
Sbjct: 164 GGQRQRVMIAMALALDPDVLIADEPTTALDVTTQAQILELIRKIQKRKNMSVMFITHDFG 223

Query: 232 VIEELCQKAIWLDKGEMRLVGESKHVV--------EEFMKTVTSMKEFEKV--EVKDELL 281
           V+ E+  + + ++KG +   G +  V+        +  +  V  M+  E+   E    +L
Sbjct: 224 VVAEIADRVVVMEKGYLVEQGRADQVLINPVHPYTQRLVAAVPRMRSVERSIDEEVPVVL 283

Query: 282 KLENVEKRYVSVDRGI-----VKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIP 336
           ++EN+EK Y S          VKAV+ +   + + +  G+VG SG+GK++L +++  ++ 
Sbjct: 284 EVENLEKEYRSSGSFFRKARTVKAVNNVSFKLRKGQTLGVVGESGSGKSSLGRVLLKLLD 343

Query: 337 PSKGNYEFRLADEWVDMTKVGPLYRGRAKRYIGMLFQE--YSLYPHRTILYNLTES-IGL 393
           P  G   F    +  D+  +        + YI M+FQ+   SL P  TI   LT   +  
Sbjct: 344 PDGGAIRF----DGRDIATMDESAFRALRPYIQMIFQDPFASLNPRHTIGKILTVGPLAH 399

Query: 394 EMPGEFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLD 453
            M    A+ KA   L  VG  E+      ++ P E S G++ R+ +A+ L+ +P +++ D
Sbjct: 400 GMALHEARTKALGILKLVGLDEQA----YDRFPHEFSGGQRQRIGIARALMFDPVVLVAD 455

Query: 454 EPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKP 513
           E    +D   + QV E + + + E+    + ++HD+     +CD   ++  G +++ G P
Sbjct: 456 EAVSALDVSIQAQVLELLARVQREMKVAMIFITHDLRVASQICDDVLVMHKGTVVEQGPP 515

Query: 514 DEIVK 518
            +I +
Sbjct: 516 TKIFR 520



 Score = 87.4 bits (215), Expect = 1e-21
 Identities = 68/251 (27%), Positives = 127/251 (50%), Gaps = 20/251 (7%)

Query: 278 DELLKLENVEKRYVSVDRGIVK--AVDGIDVSINEKEIFGLVGVSGAGKT----TLSKII 331
           D +L + N+    V + RG+ +  AV  I   ++  EI  ++G SG+GK+    T+  ++
Sbjct: 9   DVVLSVRNLT---VDLPRGMERSHAVKDISFDLHAGEILCIIGESGSGKSVTASTIMGLL 65

Query: 332 AAVIPPSKGNYEFRLADEWVDMT-KVGPLYRGRAKRYIGMLFQE--YSLYPHRTILYNLT 388
           + VI  S G  +F+  D       K+ PL RG+A   + ++FQ+   +L P  T+   + 
Sbjct: 66  SPVITVSSGEIQFKGMDILAAKEEKIRPL-RGQA---VSIIFQDPLSALNPLMTVGDQVA 121

Query: 389 ESIGLEMPG--EFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIRE 446
           E +     G  E    K    L  VG  +     +  ++P  LS G++ RV +A  L  +
Sbjct: 122 EVLEAHGVGTRETRNAKVLELLEEVGLPDPLLMRL--QYPFRLSGGQRQRVMIAMALALD 179

Query: 447 PHLILLDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGK 506
           P +++ DEPT  +D  T+ Q+ E I+K +   + + + ++HD   V  + DR  ++  G 
Sbjct: 180 PDVLIADEPTTALDVTTQAQILELIRKIQKRKNMSVMFITHDFGVVAEIADRVVVMEKGY 239

Query: 507 IIKTGKPDEIV 517
           +++ G+ D+++
Sbjct: 240 LVEQGRADQVL 250