Pairwise Alignments
Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2
Subject, 548 a.a., dipeptide ABC transporter ATPase from Agrobacterium fabrum C58
Score = 160 bits (405), Expect = 1e-43
Identities = 134/536 (25%), Positives = 257/536 (47%), Gaps = 68/536 (12%)
Query: 3 LLEVKNVS---KSYGDT-EVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGM--EGYE 56
LL+V+N++ +YG T +VL+NV+F + G+ + ++G +G+GKSV + G +
Sbjct: 5 LLKVENLNVTFSNYGRTRQVLRNVAFTVAAGERVALIGETGSGKSVTAKTIIGTLPKNAA 64
Query: 57 PTSGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIML 116
TSG II +V A + ++ T + D ++ + + + ++
Sbjct: 65 ITSGAIIIDG------RDVLALPRREREALKGTAFSLIMQDPLSSFNPVFKIGTHLDDVM 118
Query: 117 QRTFALYGEKTVAENIMEALTAAGYEGKDATEWALNLIKMVKLEHRVAHISRDLSGGEKQ 176
+ + +K N +A E ++ L +++ E + +LSGG +Q
Sbjct: 119 R-----FADKRDGINSSKA------ERRNRIAAVLRRVQLADTERVMNAYPSELSGGMRQ 167
Query: 177 RVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEEL 236
RV++ + P + +ADEP LD T + N + + V + N+A+++ +H V+ ++
Sbjct: 168 RVLIGLALLHQPKLLIADEPGTALDVTTQDEILNLINQLVAEENMALLMITHNLGVVRKV 227
Query: 237 CQKAIWLDKGEMRLVGESKHVVEE----------------FMKTVTSMKEFEKVEVKDEL 280
+ + + G++ G ++ + VT + + + +
Sbjct: 228 ADRVVVMHHGDIVETGPCTQILHSPAADYTRSLLDAVPPLYGSRVTDLAQ----STRQPI 283
Query: 281 LKLENVEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKG 340
+ +E + K Y R AV +++++ E E+FGL G SG+GKT+++++I + P+ G
Sbjct: 284 ITIEGLNKIYGR--RNGYHAVRDVNITLKEGEVFGLAGESGSGKTSVARMIMGLSRPTSG 341
Query: 341 NYEFRLADEWVDMTKVGPLYRGRAKRYIGMLFQE--YSLYPHRTILYNLT---ESIGLEM 395
N + R KR +++Q SL P RT+ L +SIG++
Sbjct: 342 NLV------------IDAPVPERGKRLTQIVYQNPGTSLNPKRTVRQTLALPLKSIGMDG 389
Query: 396 PGEFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEP 455
++M+ LV + ++ L K+P ELS G+K RVA+A+ L EP +++LDEP
Sbjct: 390 QVRESRMQELMELVRL------PQSYLGKYPHELSGGQKQRVAIARALAAEPKILILDEP 443
Query: 456 TGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTG 511
T +D + V + + + R EL TY+++SHD+ + N C R A++ G+I++ G
Sbjct: 444 TAALDVSVQKTVIDLLLQLRKELGLTYLMISHDLSLMRNFCSRIAIMLRGEIVEEG 499
Score = 80.1 bits (196), Expect = 2e-19
Identities = 65/263 (24%), Positives = 121/263 (46%), Gaps = 43/263 (16%)
Query: 3 LLEVKNVSKSYGDTE---VLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTS 59
++ ++ ++K YG +++V+ L EG+V G+ G SG+GK+ + M+ G+ PTS
Sbjct: 283 IITIEGLNKIYGRRNGYHAVRDVNITLKEGEVFGLAGESGSGKTSVARMIMGLS--RPTS 340
Query: 60 GQIIYHVAYCPHCENVEAP-SQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQR 118
G ++ ++AP + GK+ +I Y
Sbjct: 341 GNLV-----------IDAPVPERGKRL----------------TQIVYQ---------NP 364
Query: 119 TFALYGEKTVAENIMEALTAAGYEGKDATEWALNLIKMVKL-EHRVAHISRDLSGGEKQR 177
+L ++TV + + L + G +G+ L+++V+L + + +LSGG+KQR
Sbjct: 365 GTSLNPKRTVRQTLALPLKSIGMDGQVRESRMQELMELVRLPQSYLGKYPHELSGGQKQR 424
Query: 178 VVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELC 237
V +AR +A P I + DEPT LD K V + L + + + ++ SH ++ C
Sbjct: 425 VAIARALAAEPKILILDEPTAALDVSVQKTVIDLLLQLRKELGLTYLMISHDLSLMRNFC 484
Query: 238 QKAIWLDKGEMRLVGESKHVVEE 260
+ + +GE+ G + V E
Sbjct: 485 SRIAIMLRGEIVEEGVTSAVFAE 507
Score = 68.2 bits (165), Expect = 8e-16
Identities = 56/253 (22%), Positives = 115/253 (45%), Gaps = 19/253 (7%)
Query: 278 DELLKLENVEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPP 337
+ LLK+EN+ + + R + + + ++ E L+G +G+GK+ +K I +P
Sbjct: 3 EPLLKVENLNVTFSNYGR-TRQVLRNVAFTVAAGERVALIGETGSGKSVTAKTIIGTLPK 61
Query: 338 SKGNYEFRLADEWVDMTKVGPLYRGRAKRYIGMLFQEYSLYPHRTILYNLTESIGLEMPG 397
+ + +D V L R + G F P + +N IG +
Sbjct: 62 NAAITSGAII---IDGRDVLALPRREREALKGTAFSLIMQDPLSS--FNPVFKIGTHLDD 116
Query: 398 EF-----------AKMKAEHTLVSVGFTEE--EAENMLEKHPSELSVGEKHRVALAQVLI 444
+K + + + +V + + E ++ +PSELS G + RV + L+
Sbjct: 117 VMRFADKRDGINSSKAERRNRIAAVLRRVQLADTERVMNAYPSELSGGMRQRVLIGLALL 176
Query: 445 REPHLILLDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRG 504
+P L++ DEP +D T++++ I + +E + ++++H++ V V DR ++
Sbjct: 177 HQPKLLIADEPGTALDVTTQDEILNLINQLVAEENMALLMITHNLGVVRKVADRVVVMHH 236
Query: 505 GKIIKTGKPDEIV 517
G I++TG +I+
Sbjct: 237 GDIVETGPCTQIL 249