Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 630 a.a., ABC transporter, nucleotide binding/ATPase protein (oligopeptide) from Agrobacterium fabrum C58

 Score =  147 bits (370), Expect = 2e-39
 Identities = 140/571 (24%), Positives = 254/571 (44%), Gaps = 80/571 (14%)

Query: 3   LLEVKNVSKSY----GDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPT 58
           LL ++N+  S+    G  + +++ S  +  G V  ++G SG+GKSV+   + G+    P 
Sbjct: 7   LLRIENLRVSFSLMGGTIDAVRDTSLRILPGKVTALVGESGSGKSVIGQTIMGIH---PK 63

Query: 59  SGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQR 118
           + ++   V +         P  + +  +             +  EI      +I ++ Q 
Sbjct: 64  TARVNGRVLFTDPENAAAGPIDLLQLPK-------------DGREIRSIRGNRIGLIFQE 110

Query: 119 TFALYGE-KTVAENIMEALTAAGY----EGKDATEWALNLIKMVKLEHRVAHISRDLSGG 173
               +    T+   I EAL         E  +     L+L+   K +  V     +LSGG
Sbjct: 111 PMTSFSPLHTIGNQIDEALRIHSILSPAERAEKMYETLDLVGFSKPKKVVNMYPFELSGG 170

Query: 174 EKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVI 233
            +QR ++A  +   P + +ADEPT  LD      +   L +   + N++M++ +H   V+
Sbjct: 171 MRQRAMIAMALICRPALLIADEPTTALDVTIQAQILKLLRDLQSRLNMSMLLITHDLGVV 230

Query: 234 EELCQKAIWLDKGEMRLVGESKHV---------------VEEF-MKTVTSMKEFEKVEVK 277
             +  +   + +GE+   G    +               V  F MK    +K   +++V 
Sbjct: 231 ANIADEVAVIYQGEIMEAGTVDDIFKAPGHPYLKGLMAAVPHFDMKPGERLKALREIKVD 290

Query: 278 DE----------------LLKLENVEKRYVS--------VDRGIVKAVDGIDVSINEKEI 313
            E                LL ++N+ K + +         D    KAV+ +   I   E 
Sbjct: 291 HESLVGKKTAAVNKTPGPLLTVDNISKTFTTRKSSWFRKSDANATKAVNSVSFEICRGEC 350

Query: 314 FGLVGVSGAGKTTLSKIIAAVIPPSKGNYEFRLADEWVDM--TKVGPLYRGRAKRYIGML 371
            GLVG SG+GKTT+SKI+   + P +G+  F   +  +D+   K G L   R+K  I M+
Sbjct: 351 LGLVGESGSGKTTVSKILMRAVRPDEGSITFHRPEGDIDVLNAKDGDLKELRSK--IQMV 408

Query: 372 FQE--YSLYPHRTILYNLTESIGLEMPGEFAKMKAEHT---LVSVGFTEEEAENMLEKHP 426
           FQ+   SL P  T+   L+E + +   G+ AK +AE     + ++G      E+ L ++P
Sbjct: 409 FQDPISSLSPRMTVGNILSEPLEIHGRGD-AKYRAEKVRGLVRAIGL----GESALNRYP 463

Query: 427 SELSVGEKHRVALAQVLIREPHLILLDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVS 486
              S G++ R+ +A+ L   P L++ DEP   +D   + Q+   ++  + +L  TY+ +S
Sbjct: 464 HSFSGGQRQRIGIARALALGPELLICDEPVSALDVSVQAQILNLLKDLQQDLGLTYLFIS 523

Query: 487 HDMDFVLNVCDRAALVRGGKIIKTGKPDEIV 517
           H++  V  + DR A++  G+I++   P EI+
Sbjct: 524 HNLAVVDYMADRVAVMCEGRIVELA-PREIL 553



 Score = 98.2 bits (243), Expect = 8e-25
 Identities = 73/255 (28%), Positives = 131/255 (51%), Gaps = 19/255 (7%)

Query: 279 ELLKLENVEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPS 338
           +LL++EN+   + S+  G + AV    + I   ++  LVG SG+GK+ + + I  + P +
Sbjct: 6   DLLRIENLRVSF-SLMGGTIDAVRDTSLRILPGKVTALVGESGSGKSVIGQTIMGIHPKT 64

Query: 339 -KGNYEFRLAD---------EWVDMTKVGPLYRGRAKRYIGMLFQE--YSLYPHRTILYN 386
            + N      D         + + + K G   R      IG++FQE   S  P  TI   
Sbjct: 65  ARVNGRVLFTDPENAAAGPIDLLQLPKDGREIRSIRGNRIGLIFQEPMTSFSPLHTIGNQ 124

Query: 387 LTESIGLEM---PGEFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVL 443
           + E++ +     P E A+ K   TL  VGF++ +   ++  +P ELS G + R  +A  L
Sbjct: 125 IDEALRIHSILSPAERAE-KMYETLDLVGFSKPK--KVVNMYPFELSGGMRQRAMIAMAL 181

Query: 444 IREPHLILLDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVR 503
           I  P L++ DEPT  +D   + Q+ + ++  +S L+ + ++++HD+  V N+ D  A++ 
Sbjct: 182 ICRPALLIADEPTTALDVTIQAQILKLLRDLQSRLNMSMLLITHDLGVVANIADEVAVIY 241

Query: 504 GGKIIKTGKPDEIVK 518
            G+I++ G  D+I K
Sbjct: 242 QGEIMEAGTVDDIFK 256