Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 385 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  127 bits (318), Expect = 1e-33
 Identities = 83/253 (32%), Positives = 136/253 (53%), Gaps = 24/253 (9%)

Query: 281 LKLENVEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKG 340
           ++ ENV KR+     G   AV+ + + I E+E F L+G SG GKTTL +++A    P++G
Sbjct: 24  IRFENVTKRF-----GDFVAVNNLTLDIYEREFFSLLGPSGCGKTTLMRMLAGFEEPTEG 78

Query: 341 NYEFRLADEWVDMTKVGPLYRGRAKRYIGMLFQEYSLYPHRTILYNLTESIGLE---MPG 397
               R+  +  D++ V P      KR   M+FQ Y+L+PH ++  N+  + GLE   +P 
Sbjct: 79  ----RILLQGKDISGVPPY-----KRPTNMMFQSYALFPHMSVEKNV--AFGLEQDGLPK 127

Query: 398 EFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTG 457
                + E  L  V  TE       ++ PS+LS G++ RVALA+ L + P ++LLDEP G
Sbjct: 128 ADIAARVEEMLRLVKLTE-----FAKRKPSQLSGGQRQRVALARSLAKRPKVLLLDEPLG 182

Query: 458 TMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEIV 517
            +D   R +    +   ++ L  T++IV+HD +  + V DR A++  G +++   P EI 
Sbjct: 183 ALDKKLREETQFELMDIQTNLGLTFLIVTHDQEEAMTVSDRIAVMDKGNVVQVATPAEIY 242

Query: 518 KILSEEEKDEMIG 530
           +  +     + IG
Sbjct: 243 EAPNTRYVADFIG 255



 Score = 95.5 bits (236), Expect = 3e-24
 Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 36/256 (14%)

Query: 4   LEVKNVSKSYGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSGQII 63
           +  +NV+K +GD   + N++ ++ E +   +LG SG GK+ L+ ML G E  EPT G+I+
Sbjct: 24  IRFENVTKRFGDFVAVNNLTLDIYEREFFSLLGPSGCGKTTLMRMLAGFE--EPTEGRIL 81

Query: 64  YHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTFALY 123
                             GK       Y                  K+   M+ +++AL+
Sbjct: 82  LQ----------------GKDISGVPPY------------------KRPTNMMFQSYALF 107

Query: 124 GEKTVAENIMEALTAAGYEGKDATEWALNLIKMVKLEHRVAHISRDLSGGEKQRVVLARQ 183
              +V +N+   L   G    D       ++++VKL          LSGG++QRV LAR 
Sbjct: 108 PHMSVEKNVAFGLEQDGLPKADIAARVEEMLRLVKLTEFAKRKPSQLSGGQRQRVALARS 167

Query: 184 IAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKAIWL 243
           +AK P + L DEP G LD K  +     L +      +  +I +H  E    +  +   +
Sbjct: 168 LAKRPKVLLLDEPLGALDKKLREETQFELMDIQTNLGLTFLIVTHDQEEAMTVSDRIAVM 227

Query: 244 DKGEMRLVGESKHVVE 259
           DKG +  V     + E
Sbjct: 228 DKGNVVQVATPAEIYE 243