Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 546 a.a., ABC transporter, nucleotide binding/ATPase protein (peptide) from Agrobacterium fabrum C58

 Score =  149 bits (376), Expect = 3e-40
 Identities = 137/545 (25%), Positives = 257/545 (47%), Gaps = 67/545 (12%)

Query: 3   LLEVKNVSKSY---GDTEV-LKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPT 58
           LL V+++S ++   G T V + +VSF+L  G+V+ ++G SG+GKSV  + +  +  Y   
Sbjct: 9   LLSVRDLSVAFHQGGATSVAVDHVSFDLMPGEVVALVGESGSGKSVTANSILKLLPYPAA 68

Query: 59  S---GQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIM 115
           S   G+I++                 GK      E   ++V     N+IT   ++ +   
Sbjct: 69  SHPSGKILFD----------------GKDMLTLPERALRAV---RGNDITMIFQEPMT-- 107

Query: 116 LQRTFALYGEKTVAENIMEALTA-AGYEGKDATEWALNLIKMVKL---EHRVAHISRDLS 171
                +L    T+   I E L       G +A +  L L+  V +   E R+     +LS
Sbjct: 108 -----SLNPLHTIERQIGEILELHQAITGAEARQRTLELLLQVGIREPEKRLKAYPHELS 162

Query: 172 GGEKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPE 231
           GG++QRV++A  +A  P + +ADEPT  LD      +   L +   +H ++M+  +H   
Sbjct: 163 GGQRQRVMIAMALANRPKLLIADEPTTALDVTVQAQILELLGDLKTQHGMSMLFITHDLG 222

Query: 232 VIEELCQKAIWLDKGEMRLVG-------ESKHVVEEFMKTVTSMKEFEKVEVKDELLKLE 284
           ++ +   +   + KG++   G       + +H     +       E    +    ++   
Sbjct: 223 IVRKFADRVCVMTKGKIVETGTVEQVFTDPQHAYTRHLLAAEPKGEPPHSDASKPVVMQG 282

Query: 285 NVEKRYVSVDRGI-------VKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPP 337
           +  K +  +  G+       VKAVDGID+++   +  G+VG SG+GKTTL   ++ +I  
Sbjct: 283 DDIKVWFPIKAGLMRRVIDHVKAVDGIDITLRAGQTVGVVGESGSGKTTLGLALSRLIA- 341

Query: 338 SKGNYEF--RLADEW-VDMTKVGPLYRGRAKRYIGMLFQEY--SLYPHRTILYNLTESIG 392
           SKG   F  +  D +  +M K  PL     +  + ++FQ+   SL P  ++   + E  G
Sbjct: 342 SKGRISFIGQSIDSYSYEMMK--PL-----RNRLQVVFQDPYGSLSPRMSVGEIIAE--G 392

Query: 393 LEMPGEFAKMKAEHTLVSVGFTEEEAENMLE-KHPSELSVGEKHRVALAQVLIREPHLIL 451
           L++           T V+    E   +     ++P E S G++ R+A+A+ ++ +P  ++
Sbjct: 393 LKVHERSLSADERDTRVATALEEVGLDPATRWRYPHEFSGGQRQRIAIARAMVLKPRFVM 452

Query: 452 LDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTG 511
           LDEPT  +D   + QV + ++  +++ +  Y+ +SHD+  V  + +   ++R GK++++G
Sbjct: 453 LDEPTSALDMSVQAQVVDLLRDLQAKHELAYLFISHDLRVVKALANDLIVMRHGKVVESG 512

Query: 512 KPDEI 516
              EI
Sbjct: 513 PAAEI 517