Pairwise Alignments

Query, 216 a.a., DNA repair and recombination protein RadB from Methanococcus maripaludis S2

Subject, 344 a.a., recombinase RecA from Rhodanobacter sp000427505 FW510-R12

 Score = 45.8 bits (107), Expect = 1e-09
 Identities = 36/185 (19%), Positives = 88/185 (47%), Gaps = 13/185 (7%)

Query: 8   GNIEKKTITQIYGPPGVGKTNICIISMLKAIENGKNVVYIDTEGSLSIERIKQLSGKDCD 67
           G + +  + +IYGP   GKT + + ++      G    +ID E +L     ++L  K   
Sbjct: 53  GGLPRGRVVEIYGPESSGKTTMTLQAIANCQRAGGTAAFIDAEHALDPSYAEKLGVK--- 109

Query: 68  ELLKNIIIYEPSSFEEQSEALEKIFLLENVGLIIIDGIVSLY-RLELCDKINE-NTKLNR 125
             + ++++ +P + E+  E  + +     V ++++D + +L  + E+  ++ + +  L+ 
Sbjct: 110 --VDDLLVSQPDTGEQALEIADMLVRSGAVDMVVVDSVAALTPKAEIEGEMGDSHVGLHA 167

Query: 126 MLGKQISNLLKVSRQKNSGILI-TNQVKDSINGI-----EPAGGRLLEYWSKSIIKIEKS 179
            L  Q    L  + +K+  ++I  NQ++  I  +        GG  L++++   + I + 
Sbjct: 168 RLMSQALRKLTANIKKSGCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRI 227

Query: 180 ESIRK 184
            +++K
Sbjct: 228 GAVKK 232