Pairwise Alignments

Query, 216 a.a., DNA repair and recombination protein RadB from Methanococcus maripaludis S2

Subject, 355 a.a., Protein RecA from Pseudomonas putida KT2440

 Score = 55.5 bits (132), Expect = 1e-12
 Identities = 47/207 (22%), Positives = 98/207 (47%), Gaps = 19/207 (9%)

Query: 8   GNIEKKTITQIYGPPGVGKTNICIISMLKAIENGKNVVYIDTEGSLSIERIKQLSGKDCD 67
           G + K  I +IYGP   GKT + +  + +A +NG    ++D E +L  E   +L G + D
Sbjct: 53  GGLPKGRIVEIYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKL-GVNVD 111

Query: 68  ELLKNIIIYEPSSFEEQSEALEKIFLLENVGLIIIDGIVSLY-RLELCDKINE-NTKLN- 124
           +LL    + +P + E+  E  + +     V +II+D + +L  + E+  ++ + +  L  
Sbjct: 112 DLL----VSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQA 167

Query: 125 RMLGKQISNLLKVSRQKNSGILITNQVKDSINGI-----EPAGGRLLEYWSKSIIKIEKS 179
           R++ + +  +    +  N  ++  NQ++  I  +        GG  L++++   + I ++
Sbjct: 168 RLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRT 227

Query: 180 ESIRKLTLEKHRHAKEGENLRFKILQN 206
            ++      K      G   R KI++N
Sbjct: 228 GAV------KEGDEVVGSETRVKIVKN 248