Pairwise Alignments

Query, 216 a.a., DNA repair and recombination protein RadB from Methanococcus maripaludis S2

Subject, 359 a.a., DNA recombination/repair protein RecA from Magnetospirillum magneticum AMB-1

 Score = 59.3 bits (142), Expect = 9e-14
 Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 19/209 (9%)

Query: 8   GNIEKKTITQIYGPPGVGKTNICIISMLKAIENGKNVVYIDTEGSLSIERIKQLSGKDCD 67
           G + +  I ++YGP   GKT + +  + +A + G    ++D E +L     ++L G + D
Sbjct: 65  GGVPRGRIIEVYGPESSGKTTLALHIIAEAQKKGGTCAFVDAEHALDPSYARKL-GVNLD 123

Query: 68  ELLKNIIIYEPSSFEEQSEALEKIFLLENVGLIIIDGIVSLY-RLELCDKINEN-TKLNR 125
           ELL    I +P + E+  E  + +     V ++++D + +L  R EL  ++ +N   L+ 
Sbjct: 124 ELL----ISQPDAGEQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDNHMGLHA 179

Query: 126 MLGKQISNLLKVSRQKNSGILI-TNQVKDSI-----NGIEPAGGRLLEYWSKSIIKIEKS 179
            L  Q    L  S  K+  I+I  NQ++  I     N     GG  L++++   +++E  
Sbjct: 180 RLMSQALRKLTGSVSKSKTIVIFINQIRMKIGVMFGNPETTTGGNALKFYAS--VRME-- 235

Query: 180 ESIRKLTLEKHRHAKEGENLRFKILQNGL 208
             IR++   K R    G   R K+++N L
Sbjct: 236 --IRRVGAIKDRDEVVGNQTRVKVVKNKL 262