Pairwise Alignments

Query, 216 a.a., DNA repair and recombination protein RadB from Methanococcus maripaludis S2

Subject, 353 a.a., recombinase RecA from Serratia liquefaciens MT49

 Score = 55.8 bits (133), Expect = 1e-12
 Identities = 50/207 (24%), Positives = 96/207 (46%), Gaps = 19/207 (9%)

Query: 8   GNIEKKTITQIYGPPGVGKTNICIISMLKAIENGKNVVYIDTEGSLSIERIKQLSGKDCD 67
           G +    I +IYGP   GKT + +  +  A   GK   +ID E +L     K+L G D D
Sbjct: 55  GGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKL-GVDID 113

Query: 68  ELLKNIIIYEPSSFEEQSEALEKIFLLENVGLIIIDGIVSLY-RLELCDKINENTK--LN 124
               N++  +P + E+  E  + +     V +II+D + +L  + E+  +I ++      
Sbjct: 114 ----NLLCSQPDTGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAA 169

Query: 125 RMLGKQISNLLKVSRQKNSGILITNQVKDSI-----NGIEPAGGRLLEYWSKSIIKIEKS 179
           RM+ + +  L    +  N+ ++  NQ++  I     N     GG  L++++   ++++  
Sbjct: 170 RMMSQAMRKLAGNLKNANTLLIFINQIRMKIGVMFGNPETTTGGNALKFYAS--VRLD-- 225

Query: 180 ESIRKLTLEKHRHAKEGENLRFKILQN 206
             IR++   K      G   R K+++N
Sbjct: 226 --IRRIGAVKEGDEVVGSETRVKVVKN 250