Pairwise Alignments

Query, 216 a.a., DNA repair and recombination protein RadB from Methanococcus maripaludis S2

Subject, 345 a.a., protein RecA from Kangiella aquimarina DSM 16071

 Score = 52.8 bits (125), Expect = 8e-12
 Identities = 44/207 (21%), Positives = 99/207 (47%), Gaps = 19/207 (9%)

Query: 8   GNIEKKTITQIYGPPGVGKTNICIISMLKAIENGKNVVYIDTEGSLSIERIKQLSGKDCD 67
           G + K  I +IYGP   GKT + + ++    +NG    ++D E +L     ++L G + D
Sbjct: 54  GGLPKGRIVEIYGPESSGKTTLALQAIANCQKNGGTAAFVDAEHALDPIYAEKL-GVNLD 112

Query: 68  ELLKNIIIYEPSSFEEQSEALEKIFLLENVGLIIIDGIVSLY-RLELCDKINENTK--LN 124
           EL    I+ +P + E+  E  + +     V ++++D + +L  + E+  ++ ++      
Sbjct: 113 EL----IVSQPDTGEQALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGEMGDSHMGLQA 168

Query: 125 RMLGKQISNLLKVSRQKNSGILITNQVKDSINGI-----EPAGGRLLEYWSKSIIKIEKS 179
           R++ + +  L    ++ N+  +  NQ++  I  +        GG  L++++   ++++  
Sbjct: 169 RLMSQALRKLTANIKRSNTLCVFINQIRMKIGVMFGSPETTTGGNALKFYAS--VRLD-- 224

Query: 180 ESIRKLTLEKHRHAKEGENLRFKILQN 206
             IR++   K      G   R K+++N
Sbjct: 225 --IRRIGQIKQGDEIVGNETRVKVVKN 249