Pairwise Alignments

Query, 430 a.a., tRNA pseudouridine(13) synthase TruD from Methanococcus maripaludis S2

Subject, 167 a.a., tRNA pseudouridine(13) synthase (EC 5.4.99.27) from Variovorax sp. SCN45

 Score = 57.4 bits (137), Expect = 3e-13
 Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 17/157 (10%)

Query: 59  LKKYPEDFIVEEITPEGTVLEVGKEIGFEDVEKWHGSFIHFTVEKTNWNTMDALKQIVRA 118
           ++  PEDF VEE+                      G  +  TVEK   NT  A K++ + 
Sbjct: 25  IRSAPEDFRVEELPSFAA--------------SGSGEHLLLTVEKRGMNTAFAAKRLAQW 70

Query: 119 TKTKRKNFGFAGTKDKFAVTTQRFGCFGLKK--EQLENINIKDIVIRDVQKTNKKLRMGG 176
                   G+AG KD+ AVT QRF     K+    L  +   ++ + +     KKL  G 
Sbjct: 71  AGVGEVAIGYAGLKDRHAVTVQRFSGHPPKRVAPDLALLESDELRVLEHHWHAKKLPRGA 130

Query: 177 LWGNKFTIKIRDLNLSEKEI-KRISDLKLDYVLNYYG 212
           L GN+F + +R++      I +R+ ++    V NY+G
Sbjct: 131 LAGNRFVLALREVEGERDRIEQRLQEISAHGVPNYFG 167