Pairwise Alignments

Query, 430 a.a., tRNA pseudouridine(13) synthase TruD from Methanococcus maripaludis S2

Subject, 348 a.a., tRNA pseudouridine(13) synthase TruD from Serratia liquefaciens MT49

 Score = 64.3 bits (155), Expect = 6e-15
 Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 18/164 (10%)

Query: 57  GTLKKYPEDFIVEEITPEGTVLEVGKEIGFEDVEKWHGSFIHFTVEKTNWNTMDALKQIV 116
           G LK  PEDF+V E            ++GFE      G  +   + K   NT      + 
Sbjct: 17  GVLKANPEDFVVVE------------DLGFEP--DGEGEHVLVNIRKNGCNTQFVADYLA 62

Query: 117 RATKTKRKNFGFAGTKDKFAVTTQRFGCF---GLKKEQLENINIKDIVIRDVQKTNKKLR 173
           R      ++  +AG KD+ AVT Q F C    G +       +++   +    +  +K+R
Sbjct: 63  RFAGIHARSVSYAGLKDRHAVTEQWF-CLHLPGKETPDFTQFSLEGCEVLASARHLRKMR 121

Query: 174 MGGLWGNKFTIKIRDLNLSEKEIKRISDLKLDYVLNYYGIQRFG 217
           +G L GN FT+ +R ++  +   +R+  ++   V NY+G QRFG
Sbjct: 122 IGTLKGNAFTLVLRHISDRQDVEQRLQAIEAGGVPNYFGSQRFG 165