Pairwise Alignments

Query, 174 a.a., RNA 2' 3'-cyclic phosphodiesterase from Methanococcus maripaludis S2

Subject, 176 a.a., RNA 2',3'-cyclic phosphodiesterase from Xanthobacter sp. DMC5

 Score = 53.1 bits (126), Expect = 2e-12
 Identities = 34/126 (26%), Positives = 66/126 (52%), Gaps = 6/126 (4%)

Query: 2   RCFLAIELKTDLKENLEVLKKQFNLKGIKTVEKENLHITVKFLGDIDDKKLEEIVNSDLK 61
           R F AIE+  ++   L +L+    L G + ++++N H+T++F+GD+DD    +I+    +
Sbjct: 3   RLFTAIEIPPEVGLGLSMLRG--GLSGARWIDQDNYHVTLRFIGDVDDATGRDIMLMLGQ 60

Query: 62  IKKVISEI--KGVGTFPNEEYIRVIWVGTTN--LQETFKNIDEKLFKLGFKKEKSYDPHI 117
           +++   +I   G+  F   +   V      N  L E     +  + +LG   E++Y PH+
Sbjct: 61  VRRPAFDIALDGLDQFGGHKPRAVFAAVKANAALMELQAEQERIMQRLGLGAERNYKPHV 120

Query: 118 TLGRVK 123
           TL R++
Sbjct: 121 TLARLR 126