Pairwise Alignments

Query, 174 a.a., RNA 2' 3'-cyclic phosphodiesterase from Methanococcus maripaludis S2

Subject, 178 a.a., RNA 2',3'-cyclic phosphodiesterase from Magnetospirillum magneticum AMB-1

 Score = 60.8 bits (146), Expect = 1e-14
 Identities = 41/179 (22%), Positives = 85/179 (47%), Gaps = 11/179 (6%)

Query: 1   MRCFLAIELKTDLKENLEVLKKQFNLKGIKTVEKENLHITVKFLGDIDDKKLEEIVNS-D 59
           +R F+ I    +L   +  L++   L G + +E  NLH+T++F+G++D+   EEI    D
Sbjct: 2   IRLFVGIGFDEELTARIATLQR--GLPGARWIEPANLHLTLRFIGEVDEDLAEEIHRGLD 59

Query: 60  LKIKKVIS-EIKGVGTFPNEEYIRVIWVGTTN---LQETFKNIDEKLFKLGFKKE-KSYD 114
             ++   +  + G+G F +      +W+G      L      I+    + G + E + ++
Sbjct: 60  ALVEPPFALTLAGLGLFGDRHQAHTLWLGVERSDALSRLAARIESAAVQAGAEPETRRFN 119

Query: 115 PHITLGRVKFIENDSKETLKKLIEKNKHVNFGKIEINSVSLMKSTLTKNGPVYETVKKW 173
           PH+TL R+K   +     ++  I+         + +   +L +STL + G  Y+ ++ +
Sbjct: 120 PHVTLARLK---HTPPGRIQDFIDATGPFREEHVAVERFTLFRSTLGRQGAQYDALEHY 175