Pairwise Alignments

Query, 174 a.a., RNA 2' 3'-cyclic phosphodiesterase from Methanococcus maripaludis S2

Subject, 193 a.a., 2'-5' RNA ligase from Kangiella aquimarina DSM 16071

 Score = 67.0 bits (162), Expect = 2e-16
 Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 17/177 (9%)

Query: 2   RCFLAIELKTDLKENLEVLKKQFNLKGIKTVEKENLHITVKFLGDIDDKKLEEIVNS--D 59
           R F AI+L  +LK  LE+L+K     G + V   N HIT+ FLG++   +LE+I+ +   
Sbjct: 13  RLFFAIDLPQELKNQLELLQKMCPFSG-RPVSPHNFHITLLFLGEVSRHQLEDILEAIEI 71

Query: 60  LKIKKVISEIKGVGTFPNEEYIRVIWVGTTNLQETFKNIDEKLFKLGF---KKEKSYDPH 116
             IK    E+     FP  E   +    +  L E  ++I+  L + G    +  K + PH
Sbjct: 72  PAIKPFQIELNQFAYFPKAEVGCLEVAPSKQLIELHQHINRNLKQAGIHIKQSSKPFRPH 131

Query: 117 ITLGRVKFIENDSKETLKKLIEKNKHVNFGKIEINSVSLMKSTLTKNGPVYETVKKW 173
           ITL R   ++++  +T          V+F ++ ++   LM+S   + G  YE +++W
Sbjct: 132 ITLFRDATVQSEITQT----------VDF-ELGVDHFCLMESQFNQKGVYYEVIEEW 177