Pairwise Alignments

Query, 174 a.a., RNA 2' 3'-cyclic phosphodiesterase from Methanococcus maripaludis S2

Subject, 197 a.a., 2'-5' RNA ligase from Agrobacterium fabrum C58

 Score = 53.5 bits (127), Expect = 2e-12
 Identities = 34/128 (26%), Positives = 71/128 (55%), Gaps = 9/128 (7%)

Query: 2   RCFLAIELKTDLKENLEVLKKQFNLKGIKTVEKENLHITVKFLGDIDDKKLEEIVNSDLK 61
           R F A+E+  +   +L +L+    L G + ++ EN HIT++F+GDID +  +E+V+   +
Sbjct: 3   RLFTALEIPRNAAMSLSLLRG--GLPGARWIDVENYHITLRFIGDIDGRTADEVVDRLDR 60

Query: 62  IKKVISEIK--GVGTFPNEEYIRVIWVGTTNLQETF---KNIDEKLFKLGFKKE-KSYDP 115
           I++   ++   G+G+F +++    IW G +   E       ++    ++G   + + + P
Sbjct: 61  IERPEFQLNLTGIGSFGSKK-PHSIWAGVSPSPEMHALQAEVERICQRIGLPPDPRKFMP 119

Query: 116 HITLGRVK 123
           H+TL R++
Sbjct: 120 HVTLARLR 127