Pairwise Alignments

Query, 258 a.a., RlmE family RNA methyltransferase from Methanococcus maripaludis S2

Subject, 224 a.a., '23S rRNA (uridine(2552)-2'-O)-methyltransferase (EC 2.1.1.166)' transl_table=11 from Sphingobium sp. HT1-2

 Score =  135 bits (340), Expect = 7e-37
 Identities = 74/200 (37%), Positives = 113/200 (56%), Gaps = 3/200 (1%)

Query: 7   RWVLQRKNDHYYNLAKRRNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQAARD 66
           RW+ +  ND Y + AK+  +RSRA +KL +L+EKF+ +K    VVDLG APGGW Q  R 
Sbjct: 23  RWLERHLNDPYVHKAKQEGWRSRAAFKLIELDEKFHFVKGSRAVVDLGVAPGGWAQVIRK 82

Query: 67  IVGEDGFIVGIDLQTVKPLPHDNIIAIKGDMTKEEILKQAKDLLPEKPDVIICDASPNIS 126
           +  +   +VGIDL  V P+P   +   + D   ++     ++ L ++PD++I D + N  
Sbjct: 83  MAPK-AAVVGIDLLPVDPIP--GVTLFEMDFMDDKAPDLLREALGQEPDLVISDMAANTV 139

Query: 127 GVWDVDHVRSLELTTMALMTATKMLKKGGNFVVKVFQGDLFEKYVQLVSEYFDKAFTTKP 186
           G    DH+R++ L   A   A + L+KGG FV KVF G    + + ++ ++F      KP
Sbjct: 140 GHAQTDHLRTMGLVEAAADFAVQNLRKGGTFVAKVFAGGTDAELLAVLKKHFTTIKHAKP 199

Query: 187 RASRDESAEVYVIGKRFNGK 206
            ASR  S E YV+ + F G+
Sbjct: 200 PASRKGSVEWYVVAQGFKGR 219