Pairwise Alignments

Query, 258 a.a., RlmE family RNA methyltransferase from Methanococcus maripaludis S2

Subject, 244 a.a., 23S rRNA methyltransferase from Magnetospirillum magneticum AMB-1

 Score =  134 bits (337), Expect = 2e-36
 Identities = 78/203 (38%), Positives = 113/203 (55%), Gaps = 7/203 (3%)

Query: 8   WVLQRKNDHYYNLAKRRNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQAARDI 67
           W+ ++ ND Y + AKR  YRSRA +K+ QL+E+F+++K    VVDLG APGGW Q A + 
Sbjct: 41  WLQRQLNDPYVHEAKRLGYRSRAAFKMIQLDERFHILKPGLRVVDLGAAPGGWTQVAVEK 100

Query: 68  VGE-----DGFIVGIDLQTVKPLPHDNIIAIKGDMTKEEILKQAKDLLPEKPDVIICDAS 122
           VG       G +VG+D+    PLP    I ++GD   ++   + K+ L    DV++ D +
Sbjct: 101 VGALKPKGGGKVVGMDILEWDPLP--GAITLQGDFLADDAPDRLKEALGGPADVVLSDMA 158

Query: 123 PNISGVWDVDHVRSLELTTMALMTATKMLKKGGNFVVKVFQGDLFEKYVQLVSEYFDKAF 182
              +G    DH+R + L  +AL  A ++L  GG FV KVFQG   +  +  + + F    
Sbjct: 159 APTTGHPSTDHLRIIGLVEVALHFALEVLTPGGTFVAKVFQGGTEKTLLDQLKKNFTTVR 218

Query: 183 TTKPRASRDESAEVYVIGKRFNG 205
             KP ASR  SAE YV+   F G
Sbjct: 219 HAKPPASRQGSAETYVVATGFRG 241