Pairwise Alignments

Query, 389 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 417 a.a., Na+/H+ antiporter from Variovorax sp. SCN45

 Score = 95.1 bits (235), Expect = 3e-24
 Identities = 80/386 (20%), Positives = 178/386 (46%), Gaps = 28/386 (7%)

Query: 9   IILTSIFIVPQILKRFNVPTITATMLAGILIGPFGLNII-----------QSSATLDTFA 57
           +ILT+  +   +L+    P++   M AG+++GP     +           +S   L + +
Sbjct: 12  VILTTARVCGWVLRHVGQPSVVGEMAAGLMLGPVVFGALFPSLHAQLFSKESLQGLSSLS 71

Query: 58  AFGVIFLMFLAGLEVD-NETLKDEFKNSLVLSLFSMLIPSIGGYLIGQYF-------GLD 109
             G++  MF+ GLE+  ++ ++++ +++  + + S+++P   G  I           G+ 
Sbjct: 72  TLGLVLFMFVVGLELRASKGVREQLRSAGYVGVLSVIVPLALGVAISPALYPTLAPAGVG 131

Query: 110 FIGSLLY-AVIFSSHSVGIVYALMDELGLIKSRFGTTVISASVVIDLISLIVISILIKMG 168
           F    L+ A   S  +  ++  ++ + G+ ++ FG   + A+ V+D+ + I+++ ++ + 
Sbjct: 132 FWPFALFMAAALSITAFPVMARILKDRGMTRTPFGQLSLGAAAVVDVFAWILLAFVVALV 191

Query: 169 GSGITSDIIPFVVLIAAYIIALLI--IIPLISKLILKELKKFHVQKIHFILLII--LISI 224
           G+G     +    L  A ++  L   + P  + L+  +  +          L+I  L++ 
Sbjct: 192 GAGEGYQGLLKTTLGMAVVLCALFFGLKPAFAWLLRTKAPEGEPSTTVMASLMIGLLVTA 251

Query: 225 IVGEHIGIHPIIGAFIIGIAVSEELTKEEHDQILNENLNAIGYGIFIPLFFLNLGMTTDI 284
           +  E + +H + GAF+ G  +  +   +   + L+E +  I   + +PLFF   G+ T  
Sbjct: 252 LATEWLHLHAVFGAFLFGACLPRD---DRLLKSLSERIEPISIVVLMPLFFALAGLGTTS 308

Query: 285 SVIFNFDNISLILVSVVTLIGLKISSGYFSLRILDYGKLKSFCGGLLTVPSLTASLVGAT 344
           +        +++L+  V   G KI+ G    R+  YG   S   G L        L+   
Sbjct: 309 NAFSGAGFGAMMLILGVAAFG-KIAGGAVGARMAGYGWRDSLATGSLMNARGLMELIVMK 367

Query: 345 LGRDLGILPEKFFVSVVVIALLTSTV 370
           +G D G++  + F  ++V+AL+T+ +
Sbjct: 368 IGLDAGLIGPELFTMLLVMALVTTAM 393