Pairwise Alignments

Query, 389 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 661 a.a., Inner membrane protein, KefB/KefC family from Variovorax sp. SCN45

 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 93/397 (23%), Positives = 182/397 (45%), Gaps = 24/397 (6%)

Query: 1   MDTYFLFFIILTSIFIVPQILKRFNVPTITATMLAGILIGPFGLNIIQSSATLDTFAAFG 60
           M ++ L  + L +  I     +   +P +   + AG+LIGP    + Q+S  +     FG
Sbjct: 1   MSSFDLTLLYLLAAVIGVVACRSLKLPPMLGYLSAGVLIGPHAFALAQNSEGIRHLGEFG 60

Query: 61  VIFLMFLAGLEVDNETL----KDEFKNSLVLSLFSMLIPSIGGYLIGQY----FGLDFIG 112
           V+FLMF+ GLE     L    K  F   L+  L +M I ++G  LI +     + L +  
Sbjct: 61  VVFLMFVIGLEFSLPKLRAMRKHVFGLGLLQVLLTMTIATVGALLIARLLPPSWQLGWQT 120

Query: 113 SLLYAVIFSSHSVGIVYALMDELGLIKSRFGTTVISASVVIDLISLIVISILIKMGG-SG 171
           +L  +   +  S  IV  LM E   ++S  G  V+   +  DL  + ++ ++  +G    
Sbjct: 121 ALALSGALTMSSTAIVVKLMAERLELESEHGKRVMGVLLFQDLAVVPLLVLIPALGAPPE 180

Query: 172 ITSDIIPFVVLIAAYIIALLII-IPLISKLILKELKKFHVQKIHFILLIILISIIVG--- 227
             +  +   +L A ++I +L+   P + +  L  + +   +++ FIL ++L+++ +    
Sbjct: 181 ALAKALGLALLKATFLIGVLLYGGPRVMRWWLTLVARRRSEEL-FILNVLLVTLGLAWLT 239

Query: 228 EHIGIHPIIGAFIIGIAVSEELTKEEHDQILNENLNAIGYGIFIPLFFLNLGMTTDISVI 287
           E  G+   +GAFI G+ VSE   K + +  +        + + + LFF+ +GM+ D  ++
Sbjct: 240 ELAGLSLALGAFIAGMLVSETEYKHQVETDIRP-----FHDVLLGLFFITVGMSLDWHIV 294

Query: 288 FNFDNISLILVSVVTLIGLKISSGYFSLRILDYGKLKSFCGGLLTVPSLTASLVGATLGR 347
              +   L+ V ++  +G K+       R+L      S   GL    +     V  TL +
Sbjct: 295 --VERWMLVGVLLLVPLGFKLGLVTVLARVLGATSGVSLRTGLYLAQAGEFGFVLLTLAQ 352

Query: 348 DLGILPEKF---FVSVVVIALLTSTVAPIYVKSLVSK 381
           +  +LP       ++ +V+++L +    +Y  ++V K
Sbjct: 353 ERSLLPPWLANPVLASMVLSMLATPFIIMYSNAIVRK 389