Pairwise Alignments

Query, 389 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 586 a.a., putative Sodium/proton antiporter from Pseudomonas putida KT2440

 Score =  105 bits (262), Expect = 3e-27
 Identities = 89/382 (23%), Positives = 181/382 (47%), Gaps = 27/382 (7%)

Query: 9   IILTSIFIVPQILKRFNVPTITATMLAGILIGP----FGLNIIQSSATLDTFAAFGVIFL 64
           +I+    +V  +  RF  P +   ++AG +IGP    FGL  I    T+ T A  GVIFL
Sbjct: 12  VIMLVAGVVTILFHRFKQPVVLGYIVAGFIIGPHTPPFGL--IHDEDTIKTLAELGVIFL 69

Query: 65  MFLAGLEVDNETLKDEFKNSLVLSLFSMLIPSIGGYLIGQYFGLDFIGSLLYAVIFSSHS 124
           MF  GLE     L      + + +   +++    G+ IG++FG   + SL    I +  S
Sbjct: 70  MFCLGLEFSLRKLFKVGATAFIAAFLEIVLMIWIGFEIGRWFGWSTMDSLFLGAILAISS 129

Query: 125 VGIVYALMDELGLIKSRFGTTVISASVVIDLISLIVISIL--IKMGGSGITSDIIPFVVL 182
             I+   +++L +   RF   +    +V D++ + +I++L  I + G+  + ++   V  
Sbjct: 130 TTIIVKALNDLKMKNERFAQLIFGVLIVEDILGIGIIALLSGIAVSGTVSSGEVFSTVGK 189

Query: 183 IAAYIIALLIIIPLISKLILKELKKFHVQKIHFILLIILISIIVG-----EHIGIHPIIG 237
           ++ +++  L+I  L+   +L  + +F   +   +LLI ++ +  G       +    ++G
Sbjct: 190 LSLFMVVALVIGILLVPRLLAYVARFESNE---MLLITVLGLCFGFCLLVVKLEYSMVLG 246

Query: 238 AFIIGIAVSEELTKEEHDQILN-ENLNAIGYGIFIPLFFLNLGMTTDISVIFNFDNISLI 296
           AF+IG  ++E        Q+L  E L      +F  +FF+ +GM  D  V+ ++    ++
Sbjct: 247 AFLIGAIMAES------RQLLKIERLIEPVRDLFSAIFFVAIGMMIDPEVLIDY-AWPIV 299

Query: 297 LVSVVTLIGLKISSGYFSLRILDYGKLKSFCG-GLLTVPSLTASLVGATLGRDLGILPEK 355
           ++++  ++G  +S G  +    + G+     G GL  +     S + A LG  L +  + 
Sbjct: 300 VITLAVVLGKMLSCGMGAFIAGNDGRTSLRVGMGLSQIGEF--SFIIAALGMTLQVTSDF 357

Query: 356 FFVSVVVIALLTSTVAPIYVKS 377
            +   V ++ +T+ + P  +++
Sbjct: 358 LYPVAVAVSAITTLLTPYLIRA 379