Pairwise Alignments

Query, 389 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 542 a.a., cation:proton antiporter from Methanococcus maripaludis S2

 Score = 97.8 bits (242), Expect = 6e-25
 Identities = 87/349 (24%), Positives = 158/349 (45%), Gaps = 22/349 (6%)

Query: 27  PTITATMLAGILIGPFGLNIIQSSATLDTFAAFGVIFLMFLAGLEVDNETLKDEFKNSLV 86
           P I   +L GIL+ P+ LNI++   ++ T   +GV  L+F+ G+ ++    K+  K SL+
Sbjct: 5   PLIIGYILTGILVSPYFLNIVRFEESISTLGHYGVTILLFMVGISLNPGYFKEIGKISLI 64

Query: 87  LSLFSMLIPSIGGYLIGQYFGLDFIGSLLYAVIFSSHSVGIVYALMDELGLIKSRFGTTV 146
             L  +L     G+LI  + G   I S+  ++  +  S  I+  L+ + G I   +G   
Sbjct: 65  TGLGQILFTFSIGFLISVFLGYSLIESMYISIALTFSSTIIIMKLISDKGDIDKLYGKIS 124

Query: 147 ISASVVIDLISLIVISILIKMGGSGITSDIIPFVVLIAAYIIALLIIIPLISKLILKELK 206
           I   +V D++++   +IL+ +    + S     + LI + I+ +L  I + +K  L    
Sbjct: 125 IGFLIVQDIVAM---AILVLISAFNVQSGAGELLFLIISKIVLILTAIYIFTKYALSNFI 181

Query: 207 KFHVQKIHFILLIILISII----VGEHIGIHPIIGAFIIGIAVSEELTKEEHDQILNENL 262
            +  +   F+ L  L+       +   +G    IGA I GI ++  +  E ++  +   +
Sbjct: 182 SYASKNQEFLFLFSLMWCFTLASLFHLLGFSSEIGALIAGIVLA--IFPERYE--IASKV 237

Query: 263 NAIGYGIFIPLFFLNLGMTTDISVIFNFDNISLILVSVVTLIG----LKISSGYFSLRIL 318
             +    F+ LFF+ LG+        NF  I  I++S+  L G    + I  G F     
Sbjct: 238 RPL-RDFFLILFFVVLGVQMTFETSGNF-IIPAIILSIFVLFGNPIIVMILMGAFG---- 291

Query: 319 DYGKLKSFCGGLLTVPSLTASLVGATLGRDLGILPEKFFVSVVVIALLT 367
            Y K   F  GL        SL+ A+LG   G + ++    + +I ++T
Sbjct: 292 -YTKKTGFLAGLTVAQISEFSLIIASLGLRNGHISQEIVSMITLIGIMT 339