Pairwise Alignments

Query, 232 a.a., endonuclease III from Methanococcus maripaludis S2

Subject, 215 a.a., Endonuclease III (EC 4.2.99.18) from Variovorax sp. SCN45

 Score = 49.3 bits (116), Expect = 6e-11
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 9/152 (5%)

Query: 58  FEVCIGAILTQNTSWPSVEKSLKNLRKLIEITPENIINLDIEQLKEAIKPSGYYNQKSVR 117
           FE+    +L+   +   V K+ + L  +   TP+ I +L +E L+E IK  G Y  K+  
Sbjct: 30  FELLAAVLLSAQATDVGVNKATRKLFPVAN-TPQAIYDLGVEGLEEYIKTIGLYRSKAKH 88

Query: 118 LKGFSEFFIKLN--HVP-TREELLKLNGVGPETADSMLLYAFKVPSFVVDAYTKRILINL 174
           L       ++ +   VP TR EL  L GVG +TA+ +L  AF   +  VD +  R+    
Sbjct: 89  LIETCRMLVEQHGGEVPRTRAELEALPGVGRKTANVVLNVAFGEATIAVDTHIFRMGNRT 148

Query: 175 NLIDGSEKYDKIKELFEENVEKNLEIYQEYHA 206
            L  G    +      E  +EK + +    HA
Sbjct: 149 GLAPGKTPLE-----VELKLEKRVPLQYRLHA 175