Pairwise Alignments

Query, 232 a.a., endonuclease III from Methanococcus maripaludis S2

Subject, 211 a.a., DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) (NCBI) from Escherichia coli BW25113

 Score = 47.0 bits (110), Expect = 3e-10
 Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 10/173 (5%)

Query: 47  NYEYPKTK---NQCFEVCIGAILTQNTSWPSVEKSLKNLRKLIEITPENIINLDIEQLKE 103
           N  +P T+   +  FE+ I  +L+   +  SV K+   L  +   TP  ++ L +E +K 
Sbjct: 16  NNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVAN-TPAAMLELGVEGVKT 74

Query: 104 AIKPSGYYNQKSVRLKGFSEFFIKLNH--VP-TREELLKLNGVGPETADSMLLYAFKVPS 160
            IK  G YN K+  +       ++ ++  VP  R  L  L GVG +TA+ +L  AF  P+
Sbjct: 75  YIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRKTANVVLNTAFGWPT 134

Query: 161 FVVDAYTKRILINLNLIDGSEKYDKIKELFEENVEKNLEIYQEYHALIVEHAK 213
             VD +  R+        G +  ++++E   + V    ++  + H  ++ H +
Sbjct: 135 IAVDTHIFRVCNRTQFAPG-KNVEQVEEKLLKVVPAEFKV--DCHHWLILHGR 184