Pairwise Alignments

Query, 886 a.a., valine--tRNA ligase from Methanococcus maripaludis S2

Subject, 948 a.a., valyl-tRNA synthetase from Pseudomonas simiae WCS417

 Score =  325 bits (834), Expect = 6e-93
 Identities = 266/954 (27%), Positives = 429/954 (44%), Gaps = 126/954 (13%)

Query: 11  LEKKVQEKWEDEKTFKFLDDEKRPPYIIDTPPPYPTGRMHLGHGLNWTYMDIIARFKRMN 70
           +E    + WE E  F          Y I  PPP  TG +H+GHG N   MD + RF+RM 
Sbjct: 10  IETSWYQTWESENYFA--PQGAGDSYTIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQ 67

Query: 71  GYDVLFPQGWDCHGLPTEVKVE---ELNNITKSDIDRHEFRRLCVELTDENVEKMRGQVR 127
           G + L+  G D  G+ T++ VE   E    ++ D+ R +F     E  D++   +  Q+R
Sbjct: 68  GRNTLWQPGTDHAGIATQMLVERQLEATGQSRHDLGREKFLEKIWEWKDQSGGNISRQIR 127

Query: 128 SLGISIDWDREYITMNPDYVRKSQTAFLKMYEKGLIYRGKHPVNWCPRCETAIAFAEVEY 187
            LG S+DW RE  TM+       + AF++++E GLIYRGK  VNW  +  TAI+  EVE 
Sbjct: 128 RLGSSVDWSRERFTMDDGLSEAVKEAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVEN 187

Query: 188 QGRTSKLNYIKFPYAENS-----GKYLEIATSRPELMAACVGIVVHPEDERYSDVVGKTV 242
                 L  +K+P A+ +       YL +AT+RPE M     + V+P DERY  ++GK V
Sbjct: 188 HDEKGFLWNLKYPLADGAKTAEGNDYLIVATTRPETMLGDAAVAVNPTDERYQALIGKFV 247

Query: 243 KVPLFDQEVNVYPDSDVEKEFGTGVVMVCTFGDKTDVTWVNRHKLEVK------------ 290
           ++PL  + + +  D   + EFGTG V +    D  D     RH L +             
Sbjct: 248 ELPLVGRRIPIIADDYCDPEFGTGCVKITPAHDFNDYEVGKRHNLPLLNIFDKNAAVLPA 307

Query: 291 -KAINEKGQLTE-----ICGKYAGKKSDDARKEIISDLISENYMIKQEPLEQNVGSCWRC 344
            +  N  G L E     I  +YAG    +ARK+I++   +   ++  +     V    R 
Sbjct: 308 CQVFNLDGTLNESIDGKIPAEYAGLDRFEARKQIVAAFDAAGLLVSVDDHALKVPKGDRS 367

Query: 345 KTPIEIIVGDQWFVNVTKLLTEVENAANE---ISWVPEHMKARLMKWIEDMGWDWCISRQ 401
            T IE  + DQW+V+ TK L E   AA E   I +VP+  +     W+ D+  DWCISRQ
Sbjct: 368 GTVIEPWLTDQWYVS-TKPLAEPAIAAVEDGRIQFVPKQYENMYFSWMRDI-QDWCISRQ 425

Query: 402 RLFATPIPVWYCKDCGEIIVAKPEDLPIDPTKESPYTCKCGNSNLVAETDVLDTWMDSSI 461
             +   IP WY  + G++ V +      D  +         +  L  + DVLDTW  S +
Sbjct: 426 LWWGHRIPAWY-DESGKVYVGR------DEAEVRAKHNLGADIALQQDNDVLDTWFSSGL 478

Query: 462 TPLVIAGWLEDEEFFKKHYPVQLRPQGHDIIRTWAFYTMVRSLAI------TGEKPWDEI 515
                 GW +  EF KK +   +   G DII  W    ++ ++ +      T + P+  +
Sbjct: 479 WTFSTLGWPQQTEFLKKFHSTDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTV 538

Query: 516 VINGMVFGEDGFKMSKSRGNVVEPGEI--------------------------------- 542
            ++G+V    G KMSKS+GNV++P +I                                 
Sbjct: 539 YVHGLVRDGQGQKMSKSKGNVLDPLDIIDGIDLETLVQKRTSGLMQPKLAKKIEKQTRDE 598

Query: 543 ----TKTYGADALRL-WASNSTIGKDVPFAWKEVEYGGRFLRKIWNACKFAKMNISDETI 597
                 +YG DALR  + S ++ G+D+ F    VE    F  KIWNA ++  +    E  
Sbjct: 599 FADGIASYGTDALRFTFCSLASTGRDIKFDMGRVEGYRNFCNKIWNAARY--VLDKGEDC 656

Query: 598 SELKSLNSISIENPVDLWILSKLNNLISKVSDDLGNYKINTVVE-IQKFLWHEFCDNYIE 656
            +      +S+    D WI+S+L    ++V+  L  ++ +   + + +F+W+++CD Y+E
Sbjct: 657 GQNGEAYELSL---ADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLE 713

Query: 657 MVKHRLYNKEESESAQQEKLMAQYTLYKVITESVKLLTPFTPHFAEIVGE-------IYE 709
           + K  L+++      Q+     + TL +V+  +++L  PF P   E + +       I  
Sbjct: 714 LSKPVLWDENAPVERQRG---TRRTLVRVLEVALRLAHPFMPFITEEIWQRLAPLAGIEG 770

Query: 710 IDDLHTSWPVSDERLISLENEFVGEVVKNTVASIRRYKS----NKGMPL-----NAELNK 760
              +   WPV++E  I    E   E +K  +   R  ++      G PL     NA    
Sbjct: 771 KTIMLQPWPVANEARIDEAAESDIEWLKTLMMGTRNIRAEMNIGPGKPLAVFVKNASAED 830

Query: 761 VEMYVSDEKDFNAVSK----------ASEDVKKSLKIKELEINLGKPSLEQKISEVTPNK 810
                 ++     ++K          A   +  +  + E+E+ +    L  K +E+    
Sbjct: 831 QRRLTENDPLLKKLAKLESITVLAADAEAPLSATALVGEMEVLVPMAGLIDKGAELARLD 890

Query: 811 SKIG---PEFKKDAGKV--MAFIKEADADTIEKMLSEGIETE--FGILNKEHIK 857
            +IG    E ++  GK+   AF+ +A A+ IEK  ++  E E   G L ++H +
Sbjct: 891 KEIGRLQGEVQRVGGKLSNAAFVDKAPAEVIEKERAKLAEAEQALGKLAEQHAR 944