Pairwise Alignments

Query, 886 a.a., valine--tRNA ligase from Methanococcus maripaludis S2

Subject, 948 a.a., valyl-tRNA synthetase from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  314 bits (804), Expect = 2e-89
 Identities = 245/868 (28%), Positives = 395/868 (45%), Gaps = 111/868 (12%)

Query: 11  LEKKVQEKWEDEKTFKFLDDEKRPPYIIDTPPPYPTGRMHLGHGLNWTYMDIIARFKRMN 70
           +E    + WE E  F          Y I  PPP  TG +H+GHG N   MD + RF+RM 
Sbjct: 10  IETSWYQTWESENYFA--PQGVGDSYTIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQ 67

Query: 71  GYDVLFPQGWDCHGLPTEVKVE---ELNNITKSDIDRHEFRRLCVELTDENVEKMRGQVR 127
           G + L+  G D  G+ T++ VE   E   +++ ++ R +F     E   E+   +  Q+R
Sbjct: 68  GRNTLWQPGTDHAGIATQMLVERRLEAQGVSRHELGREKFLDKIWEWKAESGGNISRQIR 127

Query: 128 SLGISIDWDREYITMNPDYVRKSQTAFLKMYEKGLIYRGKHPVNWCPRCETAIAFAEVEY 187
            LG S+DW RE  TM+       + AF++++E GLIYRGK  VNW  +  TAI+  EVE 
Sbjct: 128 RLGSSVDWSRERFTMDDGLSEAVKEAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVEN 187

Query: 188 QGRTSKLNYIKFPYAENSG-----KYLEIATSRPELMAACVGIVVHPEDERYSDVVGKTV 242
                 L  +++P A+ +       YL +AT+RPE M     + V+PEDERY  ++GK V
Sbjct: 188 HDEKGHLWNLRYPLADGAKTAEGLDYLIVATTRPETMLGDAAVAVNPEDERYKALIGKFV 247

Query: 243 KVPLFDQEVNVYPDSDVEKEFGTGVVMVCTFGDKTDVTWVNRHKLEV------------- 289
           ++PL  + + +  D   + EFGTG V +    D  D     RH L +             
Sbjct: 248 ELPLVGRRIPIIADDYCDPEFGTGCVKITPAHDFNDYEVGKRHNLPLLNIFDKNANVLPA 307

Query: 290 KKAINEKGQLTE-----ICGKYAGKKSDDARKEIISDLISENYMIKQEPLEQNVGSCWRC 344
            +  N  G L E     +   YAG    +ARK+I++   +   ++  +     V    R 
Sbjct: 308 AQVFNLDGTLNESVDGSLPAAYAGLDRFEARKQIVAAFDAAGLLVSVDDHALKVPKGDRS 367

Query: 345 KTPIEIIVGDQWFVNVTKLLTEVENAANE---ISWVPEHMKARLMKWIEDMGWDWCISRQ 401
            T IE  + DQW+V+ TK L E   AA E   I++VP+  +     W+ D+  DWCISRQ
Sbjct: 368 GTIIEPWLTDQWYVS-TKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRDI-QDWCISRQ 425

Query: 402 RLFATPIPVWYCKDCGEIIVAKPEDLPIDPTKESPYTCKCGNSNLVAETDVLDTWMDSSI 461
             +   IP WY  + G++ V + E          P         L  + DVLDTW  S +
Sbjct: 426 LWWGHRIPAWY-DESGKVYVGRDEAEVRAKNNLGPEVA------LQQDNDVLDTWFSSGL 478

Query: 462 TPLVIAGWLEDEEFFKKHYPVQLRPQGHDIIRTWAFYTMVRSLAI------TGEKPWDEI 515
                 GW E  +  K  +   +   G DII  W    ++ ++ +      T + P+  +
Sbjct: 479 WTFSTLGWPEKTKALKTFHSTDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTV 538

Query: 516 VINGMVFGEDGFKMSKSRGNVVEPGEIT-------------------------------- 543
            ++G+V    G KMSKS+GNV++P +I                                 
Sbjct: 539 YVHGLVRDGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQE 598

Query: 544 -----KTYGADALRL-WASNSTIGKDVPFAWKEVEYGGRFLRKIWNACKFAKMNISDETI 597
                 +YG DALR  + S ++ G+D+ F    VE    F  KIWNA ++    + D+  
Sbjct: 599 FADGIASYGTDALRFTFCSLASTGRDIKFDMGRVEGYRNFCNKIWNAARY----VLDK-- 652

Query: 598 SELKSLNSISIE-NPVDLWILSKLNNLISKVSDDLGNYKINTVVE-IQKFLWHEFCDNYI 655
            E    N  ++E +  D WI+S+L    ++V+  L  ++ +   + + +F+W+++CD Y+
Sbjct: 653 GEDCGQNGEAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYL 712

Query: 656 EMVKHRLYNKEESESAQQEKLMAQYTLYKVITESVKLLTPFTPHFAEIVGE-------IY 708
           E+ K  L+++      Q+     + TL +V+  +++L  PF P   E + +         
Sbjct: 713 ELSKPVLWDETAPVERQRG---TRRTLVRVLEVALRLAHPFMPFITEEIWQRLAPLAGAQ 769

Query: 709 EIDDLHTSWPVSDERLISLENEFVGEVVKNTVASIRRYKS----NKGMPLNAELNKVEMY 764
               +   WPV++E  I    E   E +K  + ++R  +       G PL   L  V   
Sbjct: 770 GKTIMLQPWPVANEARIDQAAEDDIEWLKGLMLAVRNIRGEMNIGPGKPLQLFLKNV--- 826

Query: 765 VSDEKDFNAVSKASEDVKKSLKIKELEI 792
               +D   +S+    +KK  K++ + +
Sbjct: 827 --SAEDQRRLSENDYLLKKLAKLESMTV 852