Pairwise Alignments

Query, 238 a.a., AzlC family ABC transporter permease from Methanococcus maripaludis S2

Subject, 236 a.a., Inner membrane protein YgaZ from Xanthobacter sp. DMC5

 Score = 60.5 bits (145), Expect = 3e-14
 Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 28/236 (11%)

Query: 12  EGIKDAIPISIGYLPIGMAFGVLAKSMGIPYEISILMSLIIFAGASQFVGV--------- 62
           EG +  +P+  G    GMAFG  +         + + S I+FAG +Q V +         
Sbjct: 16  EGARAMLPLMPGIAAFGMAFGAASIQKSFTLLEATVSSAIVFAGLAQMVALEGWTQHWTA 75

Query: 63  -NLIAIGTSSFEIVLTTFILNLRHFLMSSSLSQRIDYTKSKKFLSLISFGVTDETFAVAS 121
            +L+A+G         T  +N+RH LM +SL   +    + K    +     +   A   
Sbjct: 76  GSLLALG-------FLTLTVNMRHVLMGASLRPWLGTLPAWKSYPALMMMADNNWAAALR 128

Query: 122 LKEELKLSPEFLFGLNFTAFFAWNFGTVLGIFLAESIPKEIQSSMGISLYV--MFIGLLI 179
            + E      +  G     +F W   T +G  +   IP     ++GI L V   FI +L+
Sbjct: 129 YRAEGGNDVGYFVGSGLITWFVWVLATAVGHLVGGGIPD--PKAVGIDLVVPAFFIAMLL 186

Query: 180 PAVRRSTKVLKIFLVAVFISSALTWVPVFKFISTGWIIIITTIVASFIGAKFIHGD 235
           P  +   + +  + VA  +S+A++      F+  GW  I+   VA  +   F   D
Sbjct: 187 PNWKGKREAVG-WGVAAAVSTAVS------FVLPGWWFIVIGAVAGALAGGFTDDD 235