Pairwise Alignments

Query, 289 a.a., 4-hydroxy-tetrahydrodipicolinate synthase from Methanococcus maripaludis S2

Subject, 302 a.a., 2-keto-3-deoxy gluconate (KDG) aldolase; CP4-6 prophage (NCBI) from Escherichia coli BW25113

 Score =  139 bits (350), Expect = 8e-38
 Identities = 87/293 (29%), Positives = 151/293 (51%), Gaps = 8/293 (2%)

Query: 3   GVYPAIITPLK-ENKVDYDGLRNNIDFLIENGVSGVIPVGTTGESPTLTPLEHEKVVEKV 61
           G+ P + T    + ++D  G    ID LI+ GV G+  +G+ GE   L   E + +    
Sbjct: 9   GIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFA 68

Query: 62  VEFVDGRVEVIAGTGSNSTSEALEFSQYAEDVGVDGVLLITPYYNKPTQEGLKRHFGEIA 121
           ++ VD RV V+ GTG  +  E +E SQ+A+  G DG+++I PYY K ++  L R+F ++A
Sbjct: 69  IDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVA 128

Query: 122 NSINVPIVLYNVPSRTALNIEPETIKYLFNEYSNISAVKEANPNLSQVSEVLDSC----- 176
           +S+ +P++LYN P+ T  ++ P  +K L +  SNI  +K+   +++ +  ++ +      
Sbjct: 129 DSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGIKDTIDSVAHLRSMIHTVKGAHP 188

Query: 177 DIDILSGNDELTLPIISLGGKGVVSVIANIAPKEFVQMVDFANAGKFDKAKEIHYKLFPL 236
              +L G D+     + LGG G +S   N AP+  V ++     G   KA   H  L  +
Sbjct: 189 HFTVLCGYDDHLFNTLLLGGDGAISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTLLQI 248

Query: 237 MKLMFVETNPI-PIKTAMNMLGMP-SGELRLPLCEMAESNKLKLQNALNNLGL 287
            ++  ++T  +  IK A+ + G P S  +  P   + E  K +L+  L  L L
Sbjct: 249 PQMYQLDTPFVNVIKEAIVLCGRPVSTHVLPPASPLDEPRKAQLKTLLQQLKL 301