Pairwise Alignments

Query, 528 a.a., S-layer protein from Methanococcus maripaludis S2

Subject, 575 a.a., S-layer protein from Methanococcus maripaludis S2

 Score =  284 bits (726), Expect = 7e-81
 Identities = 199/582 (34%), Positives = 303/582 (52%), Gaps = 61/582 (10%)

Query: 1   MKSILKKIGCILVGST-VLSASITAAYALEKYGNINDFIDDDLIKNGNPDVYIVVGENAA 59
           M   +KKIG I VG   V SA  T A+A EK G+++ F  D ++ +GN +V IVVG NAA
Sbjct: 1   MAMSMKKIGAIAVGGAMVASALATGAFAAEKVGDVDAFAAD-VVADGNANVDIVVGSNAA 59

Query: 60  ALDVTSANKISAKIGTLTYSETIIEDEST-VEYQIIGESESIDLLDGTDKLDSAGTEKSW 118
           ALDV SA  ++AKIG+L + E  +ED S  +      ES+ I  L  T     AG +K+ 
Sbjct: 60  ALDVVSAANVAAKIGSLMFKEGTVEDGSAQITVSASAESDEIKDLWATAPAAIAGQDKA- 118

Query: 119 ILVTSADDDYAD------HFDD--EEGNSFSYSGFSEADQTKSLGHLGYLLEVGDIDPEN 170
           +++T+ DDDY         F D    G   +  G + AD    L  L  L+ V D DP  
Sbjct: 119 LVITAPDDDYTAVATGILGFADGVPAGTGLNLFGITTADAAVDLEDLQTLMIVEDADPSG 178

Query: 171 ---HFESDDDATEIVFVRITDSNKNAGSQTFDIGK--------DMVYASIV-----YPNQ 214
              +   +D     V V + ++     + TF +G         ++VYAS+      Y N 
Sbjct: 179 WDFYGTGNDFEAAEVLVAVVNTETTVPASTFGVGTPDLEVLEDEVVYASLAFVEDQYGNA 238

Query: 215 VSAFKLTKDLKEGYEIPFLGKKYRIVQIDEDDGIIYLGTASYDGTLEQGNYISSGE-YQV 273
              +     L  G  IP LG++  +V++D DD +  +GT +Y+G ++QG+    G  Y V
Sbjct: 239 AGDYAA---LFPGMRIPLLGQEMVVVKLDTDDDLAIVGTEAYEGVIKQGDSYDVGNGYTV 295

Query: 274 VIGEIL-ESGDEYSVEISILRNGNIIKEHTEILRSDKS------FSVIAGDLGVTVHDVW 326
            I  +L +SG  Y V++ +L++G ++    + +    +        ++  D+G+ V+  W
Sbjct: 296 KIANVLKQSGTAYKVDVQLLKDGKVVASKFDTVDKPAAPAAATQLKLVYKDMGIVVNAAW 355

Query: 327 TNAAADTGYADITICRSLTELKLGEEYVNNWEVRAV--TNTGGTIDFLKTYEDNTVGIAL 384
           T+   + GYA++ I  ++ E++LGEE++ ++E   V  T  G T+    T     VGIAL
Sbjct: 356 TDVGDNYGYAELVIADNVVEMELGEEFIPDYEAYTVDLTAAGLTLSDKATAAGTIVGIAL 415

Query: 385 VYSGSDIEEINDGDRIKIADYVNLVFDDEDDLDKMVAEFKAERTVTTGSTGGTVIS---- 440
            Y G D+++I+      IADY  L FD+  D  K+  +F  + +       G  +S    
Sbjct: 416 KYVGDDVDKISKDKTFTIADYAKLDFDE--DSGKIALKFLMDESKDVNINIGEKVSVLNA 473

Query: 441 --KSGEV------------PEIIMDSEIELDEADKNLILIGGPVANKLTKELQNEGKIDI 486
             K  ++            P  ++DSE  LD ADK LIL+GGPV N LT EL + G + I
Sbjct: 474 EIKLADIEAEAKEAVVMTAPIAVLDSEASLDAADKGLILVGGPVVNALTAELADAGLVAI 533

Query: 487 GNESPATASLIEGAANGNNVLVIAGGDRYSTESAVLSLINLI 528
            NESPAT ++  GAANGN+VLV+AGGDR +TE A  +LI+++
Sbjct: 534 DNESPATLAVAAGAANGNDVLVVAGGDRAATEEAAEALIDML 575