Pairwise Alignments

Query, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

Subject, 562 a.a., long-chain fatty acid--CoA ligase from Pseudomonas simiae WCS417

 Score =  237 bits (605), Expect = 8e-67
 Identities = 165/552 (29%), Positives = 275/552 (49%), Gaps = 40/552 (7%)

Query: 10  EFFEKQAQKDPDREFLVYPDRNLRFTYKEFDERTDLLAKGLLE-IGIKKGDHIGIWARNV 68
           E FE+  +   DR    + +  +  TY E + ++   A  L +   +K GD I +   NV
Sbjct: 28  EVFERSCKAFADRP--AFSNMGITLTYAELERQSAAFAGYLQQHTDLKPGDRIAVQMPNV 85

Query: 69  PDWLTFMFATAKIGVVLVTVNTAYKSHELAYVMKQSDMKALAIIDSFRDVNYLEILYEL- 127
             +   +F   + G+++V  N  Y   E+ +  K + ++AL  ++ F      E+  +  
Sbjct: 86  LHYPIAVFGALRAGLIVVNTNPLYTPREMRHQFKDAGVRALVYLNLFGS-RVQEVCSDTE 144

Query: 128 VPELKTSQRGKLNSEEFPYLKNVIYVGQEKHRGMYNTTELMLLGNYVSDEKLIEAKKGLD 187
           +  L  ++ G        +L N +    +K    Y+      L   V+ ++ +    GL 
Sbjct: 145 IDYLIEARMGDFMPTAKGWLVNTLVDKVKKMVPAYS------LPRAVAFKRALHMGAGLG 198

Query: 188 S-------DDVINMQYTSGTTGFPKGVMLTHKNILNNGYYIGEKQKFTEE---------- 230
                   DD+  +QYT GTTG  KG MLTH N++ N   +      T +          
Sbjct: 199 VTRHPVTLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMQQVRACMSQTGDDGHPLIKEGQ 258

Query: 231 ERLCLPVPLFHCFGIVLGVLALLTHGGTLVMLEIFDPLLV---LAAIQKEKCTAVYGVPT 287
           E +  P+PL+H +      + ++  G   V+  I +P  +   +  ++K + T + G+ T
Sbjct: 259 EVMIAPLPLYHIYAFTANCMCMMVSGNHNVL--ITNPRDIGGFIKELKKWRFTGLLGLNT 316

Query: 288 MFIAEFSHPMFEMFDLSSLRTGIMAGSTCPIEAMKKVMSDMYMREITISYGLTEASPVFT 347
           +F+A   HP F+  D S L+    +G T  I+A  +    +    I   YGLTE SPV +
Sbjct: 317 LFVALMDHPDFKSLDFSHLKL-TNSGGTALIKATAERWQQITGCAIGEGYGLTETSPVAS 375

Query: 348 MTSVDDPFEKRVESVGKAMPHCEVKIIDPETGETLAPGNVGEICCRGYNVMKGYYKMPEK 407
                +  + R+ +VG  +P   +K+ID + G  L  G  GE+C +G  VMKGY++ PE 
Sbjct: 376 TNPYGN--KSRLGTVGIPVPATAMKVID-DHGVELPLGERGELCIKGPQVMKGYWQQPEA 432

Query: 408 TAEVIEKDGWLHSGDLAVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDA 467
           TAE ++ +GWL +GD+AV DE+G+  IV R KD+II  G N+YP EIE+ +   P + + 
Sbjct: 433 TAEALDAEGWLKTGDIAVIDEEGFVSIVDRKKDLIIVSGFNVYPNEIEDVVMAHPAVANC 492

Query: 468 QVVGIPDEKYGEIVGAFVIPK-EGYEIKEEDVRDFALEKIARYKVPKHVFVVEEFPMTAS 526
            V+G+PDE+ GE V  FV+ + EG  +  E+++ +       YKVPKH+ + +  PMT  
Sbjct: 493 AVIGVPDERTGEAVKLFVVARAEGVSL--EELKAYCKTNFTGYKVPKHIVLRDSLPMTPV 550

Query: 527 GKIQKFKLTELA 538
           GKI + +L ++A
Sbjct: 551 GKILRRELRDIA 562