Pairwise Alignments

Query, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

Subject, 537 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  218 bits (556), Expect = 4e-61
 Identities = 156/505 (30%), Positives = 238/505 (47%), Gaps = 23/505 (4%)

Query: 35  TYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWLTFMFATAKIGVVLVTVNTAYKS 94
           ++ E D  +D  A  L  +G+KKG+ + ++  N P +L   F   KIG ++       K 
Sbjct: 37  SWAELDRASDAFAARLQALGVKKGEPVVLFLNNCPQYLVAHFGIQKIGAIVCPSGPLNKE 96

Query: 95  HELAYVMKQSDMKALAIIDSFRDVNYLEILYELVPE------LKTSQRGKLNSEEFPYLK 148
           HELAY +  +D+KA  I+ +      L ++ ++ PE              L++E    L 
Sbjct: 97  HELAYQV--NDLKARVIVAA---APLLPVVRKVQPESALEHVFAVHYADLLSAEPSLDLP 151

Query: 149 NVIYVGQEKHRGMYNTTELMLLGNYVSDEKLIEAKKGLDSDDVINMQYTSGTTGFPKGVM 208
             + V     R +    E  L    V           ++ DDV  M YTSGTTG PKG M
Sbjct: 152 AELAVEHNAARTVPEGCEDFLA---VMKSDARPQPVAIEMDDVALMTYTSGTTGLPKGAM 208

Query: 209 LTHKNILNNGYYIGEKQKFTEEERLCLPVPLFHCFGIVLGVLALLTHGGTLVMLEIFDPL 268
           L++ N L       +       + L    PL+H  G+++GV   +  G T V+L  FDP 
Sbjct: 209 LSYGNALFKTRAAADCNGVGPADVLLSIAPLYHIAGMLMGVNVPVLSGATSVLLHRFDPR 268

Query: 269 LVLAAIQKEKCTAVYGVPTMFIAEFSHPMFEMFDLSSLR----TGIMAGSTCPIEAMKKV 324
            VL AI   K +  Y +  M +A    P    FDLSSL+    T      T P+    + 
Sbjct: 269 AVLQAIASFKVSWWYSIAPMNVACMQVPDIAGFDLSSLKMNPVTSFGITFTEPLAQQWRS 328

Query: 325 MSDMYMREITISYGLTEASPVFTMTSVDDPFEKRVESVGKAMPHCEVKIIDPETGETLAP 384
            +         +YGL+E     T T    P   R  + G A+P   ++IID ET   +  
Sbjct: 329 HAPN-CTSFEAAYGLSETHTCDTYTPHHAP---RWGTQGIAVPGVTIRIIDTETQADMPA 384

Query: 385 GNVGEICCRGYNVMKGYYKMPEKTAEVIEKDGWLHSGDLAVEDEDGYYKIVGRIKDMIIR 444
           G VGEI        KGY+  PE TA  + ++GW+H+GD+   D DGY   +GR K+MI  
Sbjct: 385 GEVGEIVLTSPGSFKGYWNKPEATAATL-RNGWVHTGDMGKLDADGYLTFIGRFKEMIKV 443

Query: 445 GGENIYPREIEEFLYTMPGINDAQVVGIPDEKYGEIVGAFVIPKEGYEIKEEDVRDFALE 504
            G +++P E+E  L   P +  A V+  PD + GE+V AF++ K G  ++ + +  +A +
Sbjct: 444 SGYSVFPEEVETILIKHPAVAQAAVIAQPDAEKGEVVKAFIVRKPGAALEADALVAWARD 503

Query: 505 KIARYKVPKHVFVVEEFPMTASGKI 529
            +A YK P+ V  ++  P T +GK+
Sbjct: 504 NMASYKAPRAVSFIDALPTTGAGKV 528