Pairwise Alignments

Query, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

Subject, 519 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  243 bits (619), Expect = 2e-68
 Identities = 173/534 (32%), Positives = 264/534 (49%), Gaps = 45/534 (8%)

Query: 14  KQAQKDPDREFLVYPDRNLRFTYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWLT 73
           +  Q+ PD+  + +  R   F  +++ +R   LA  L  +G++ GD + + A N   +L 
Sbjct: 9   RSVQQHPDKVAVRFAGRTRSF--RDYADRVARLAGALRRLGMQPGDRVAMLALNSDRYLE 66

Query: 74  FMFATAKIGVVLVTVNTAYKSHELAYVMKQSDMKALAIIDSFRDVNYLEILYELVPELKT 133
           +  A    G VL   N  + + E+ Y ++ S    L + ++FR              L  
Sbjct: 67  YQMAVPWGGGVLNPCNIRWSAAEILYSLEDSGSTILLVDENFR-------------ALVE 113

Query: 134 SQRGKLNSEEFPYLKNVIYVGQEK-HRGMYNTTELMLLGNYVSDEKLIEAKKGLDSDDVI 192
             RG+  S     L+ VIY G      GM+    L+     V D     A++    +D+ 
Sbjct: 114 QMRGQATS-----LREVIYCGDGALPAGMHGYEALIDAAAPVPDT----ARR---DEDLA 161

Query: 193 NMQYTSGTTGFPKGVMLTHKNILNNGYYIGEKQKFTEEERLCLPVPLFHCFGIVLGVLAL 252
            + YT GTTGFPKGVML+H NI ++G+    +     +       P+FH     L  + L
Sbjct: 162 GIFYTGGTTGFPKGVMLSHTNICSSGFAALGEGLAPPDSSYLHAAPMFH-----LADMGL 216

Query: 253 LT----HGGTLVMLEIFDPLLVLAAIQKEKCTAVYGVPTMFIAEFSHP-MFEMFDLSSLR 307
            T     G T V++  F P  VL AI  ++ T    VPTM      HP M E  DL SLR
Sbjct: 217 ATPHWFQGSTHVIVPSFSPEAVLNAIAADRVTHALLVPTMIQMLVDHPSMREPRDLRSLR 276

Query: 308 TGIMAGSTCPIEAMKKVMSDMYMREITISYGLTEASPVFTMT-----SVDDPFEKRVESV 362
                 S      + + M      E   +YG+TE SP+ T+      + +     ++ S 
Sbjct: 277 CITYGASPISEAVLNRAMEAFPGVEFAQAYGMTELSPIATINPPSNHTAEGRKRGKLRSA 336

Query: 363 GKAMPHCEVKIIDPETGETLAPGNVGEICCRGYNVMKGYYKMPEKTAEVIEKDGWLHSGD 422
           G+A    EV+I+D + G  +  G VGE+  RG NVM+GY+  PE+TA  + +DGW+H+GD
Sbjct: 337 GRASYCMEVRIVDAD-GAEVPRGTVGEVAVRGPNVMQGYWNKPEQTAAAV-RDGWMHTGD 394

Query: 423 LAVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDEKYGEIVG 482
            A  D+DGY  +V R+KDMII GGEN+Y  E+E  +   P +    V+GIP +++GE V 
Sbjct: 395 GAYMDDDGYIFVVDRLKDMIISGGENVYSAEVENAINQHPAVAACAVIGIPSDEWGEAVH 454

Query: 483 AFVIPKEGYEIKEEDVRDFALEKIARYKVPKHVFVVEEFPMTASGKIQKFKLTE 536
           A ++ K G  I+ E++       IA YK P+ V V++  P++ +GK+ K KL E
Sbjct: 455 AALVLKPGQGIRPEELIAHCKTLIASYKCPRSVAVLDALPLSGAGKVLKTKLRE 508