Pairwise Alignments

Query, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

Subject, 553 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Sphingobium sp. HT1-2

 Score =  231 bits (589), Expect = 5e-65
 Identities = 157/537 (29%), Positives = 269/537 (50%), Gaps = 38/537 (7%)

Query: 21  DREFLVYPDR------NLRFTYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWLTF 74
           D    +YP+R         +TY +  +     A+GL + G++KGD  G+   N P +   
Sbjct: 27  DNALNLYPERVAIDFLGRTWTYAQVGQLVRRAARGLQDQGLRKGDRFGLCLPNCPYFAIL 86

Query: 75  MFATAKIGVVLVTVNTAYKSHELAYVMKQSDMKALAIIDSFRDVNYLEILYELVPELKTS 134
            FA  ++G ++V  N  Y   EL + ++ S  + +A+ D       + I++E V  +  +
Sbjct: 87  YFAALRVGAIVVNFNPLYTERELEHQIRDSGTRMMAVPD-------VRIIHEKVQAV--A 137

Query: 135 QRGKLNS-------EEFPYLKNV---IYVGQEKHRGMYNTTELMLLGNYVSDEKLIEAKK 184
            R  L+        +  P+L+ +   ++  ++  R +     + L      D +    ++
Sbjct: 138 PRAGLDKIVLCGMRDMLPWLQGLGFALFKRKDHARILDEGLHVRLKALLAHDAEPDAVER 197

Query: 185 GLDSDDVINMQYTSGTTGFPKGVMLTHKNILNNG----YYIGEKQKFTEEERLCLPVPLF 240
               DDV  +QYT GTTG PKG MLTH N+  N      ++G  +   ++ER    +P+F
Sbjct: 198 --HPDDVAVLQYTGGTTGVPKGAMLTHANLTANSAQMVVHVGGLRP--QQERTLGVLPMF 253

Query: 241 HCFGIVLGVLALLTHGGTLVMLEIFDPLLVLAAIQKEKCTAVYGVPTMFIAEFSHPMFEM 300
           H F +   +   +  G  +V+L  F+   VL  ++++  T  +GVPT+++A  + P  E+
Sbjct: 254 HVFALTTVLNFSVEIGAEIVLLPRFEMKQVLRTMKRKPPTQFFGVPTIYVALNALPDDEI 313

Query: 301 FDLSSLRTGIMAGSTCPIEAMKKVMSDMYMREITISYGLTEASPVFTMTSVDDPFEKRVE 360
            DLS++R  I  G+  P+E  ++  +    R +   YGL+E +P+     +    +    
Sbjct: 314 PDLSAVRACISGGAPLPLEVREEFEARTRARVVE-GYGLSETAPIIACNPLFGTVKDN-- 370

Query: 361 SVGKAMPHCEVKIIDPETGETLAP-GNVGEICCRGYNVMKGYYKMPEKTAEVIEKDGWLH 419
           S G + P   ++I DPE    + P G  GE+C RG  VMKGY++ P +T+ V   DG L 
Sbjct: 371 SCGPSFPGTIIEIRDPENPSRVLPQGERGEVCARGPQVMKGYWQRPAETSAVFV-DGALR 429

Query: 420 SGDLAVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDEKYGE 479
           +GD+   DEDGY  +V RIKD+I  GG N+YPR IE+  Y  P + +A  + IPD   G+
Sbjct: 430 TGDIGYFDEDGYLFLVDRIKDIIFCGGYNVYPRIIEDAAYQHPAVKEAIAIAIPDAYRGQ 489

Query: 480 IVGAFVIPKEGYEIKEEDVRDFALEKIARYKVPKHVFVVEEFPMTASGKIQKFKLTE 536
               F+   EG  +  ++++ F  +++++ ++PK     +  P T  GK+ K  L E
Sbjct: 490 SPKLFIALHEGSNLTVDELKVFLQDRLSKIEMPKAFAFRDSLPKTLIGKLSKKDLIE 546