Pairwise Alignments

Query, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

Subject, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

 Score =  486 bits (1251), Expect = e-141
 Identities = 238/534 (44%), Positives = 346/534 (64%), Gaps = 2/534 (0%)

Query: 7   TIGEFFEKQAQKDPDREFLVYPDRNLRFTYKEFDERTDLLAKGLLEIGIKKGDHIGIWAR 66
           TIG+ F+    +  D E LV   + LR+++++  E+ ++ A+ L+ +G+  GD +GIW+ 
Sbjct: 19  TIGQAFDATVARCCDSEALVSRHQGLRYSWRQLAEQVEIYARALIALGVNTGDRVGIWSP 78

Query: 67  NVPDWLTFMFATAKIGVVLVTVNTAYKSHELAYVMKQSDMKALAIIDSFRDVNYLEILYE 126
           N   W     A+AK+G +LV +N AY+  EL YV++QS  + L   ++F+  +Y  ++ E
Sbjct: 79  NCAQWCILQLASAKVGAILVNINPAYRVGELEYVLRQSGCRWLVCAEAFKTSDYHTMVQE 138

Query: 127 LVPELKTSQRGKLNSEEFPYLKNVIYVGQEKHRGMYNTTELMLLGNYVSDEKLIEAKKGL 186
           LVPEL ++  G+L SE  P L+ VI +      G              S E     ++ L
Sbjct: 139 LVPELASAAPGELASECLPELRGVISLAANPPAGFLPWHAFAERAGQTSVEACTARQQSL 198

Query: 187 DSDDVINMQYTSGTTGFPKGVMLTHKNILNNGYYIGEKQKFTEEERLCLPVPLFHCFGIV 246
             D  +N+QYTSGTTG PKG  L+H NILNNG+ +GE    T  +R+ +PVPL+HCFG+V
Sbjct: 199 QFDQPVNIQYTSGTTGAPKGATLSHYNILNNGFMVGESLGLTARDRMVIPVPLYHCFGMV 258

Query: 247 LGVLALLTHGGTLVM-LEIFDPLLVLAAIQKEKCTAVYGVPTMFIAEFSHPMFEMFDLSS 305
           +  L  +THG T++   + FD  L L A+ +E+ T +YGVPTMFIA   HP     DLS+
Sbjct: 259 MANLGCITHGSTMIYPNDAFDAELTLRAVAEERATILYGVPTMFIAMLDHPSRAHMDLST 318

Query: 306 LRTGIMAGSTCPIEAMKKVMSDMYMREITISYGLTEASPVFTMTSVDDPFEKRVESVGKA 365
           LR+GIMAG+TCPIE M++V+  M+M E+ I+YG+TE SPV   T  DD  E RV +VG+ 
Sbjct: 319 LRSGIMAGATCPIEVMRRVIDQMHMAEVQIAYGMTETSPVSLQTGPDDDLELRVTTVGRT 378

Query: 366 MPHCEVKIIDPETGETLAPGNVGEICCRGYNVMKGYYKMPEKTAEVIEKDGWLHSGDLAV 425
            P  E K++D + G  +  G +GE+C RGY+VM GY+  P+ TA+ I+  GW+HSGDLAV
Sbjct: 379 QPQLENKLVDAD-GCIVPRGEIGELCTRGYSVMLGYWDNPQATADAIDPAGWMHSGDLAV 437

Query: 426 EDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDEKYGEIVGAFV 485
            DE GY +IVGR KDMIIRGGENIYPRE+EEF YT P + DAQV+GIP  +YGE + A++
Sbjct: 438 MDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIVAWI 497

Query: 486 IPKEGYEIKEEDVRDFALEKIARYKVPKHVFVVEEFPMTASGKIQKFKLTELAV 539
               G+    E+++ +   +IA +KVP+++  V+E+PMT +GK+QKF++ E++V
Sbjct: 498 KLHPGHSATVEELQGWCKARIAHFKVPRYIRFVDEYPMTVTGKVQKFRMREISV 551