Pairwise Alignments

Query, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

Subject, 515 a.a., long-chain-fatty-acid--CoA ligase from Pseudomonas putida KT2440

 Score =  221 bits (563), Expect = 5e-62
 Identities = 162/529 (30%), Positives = 267/529 (50%), Gaps = 40/529 (7%)

Query: 8   IGEFFEKQAQKDPDREFLVYPDRNLRFTYKEFDERTDLLAKGLLEIGIKKGDHIGIWARN 67
           +G    + A+  P+R  L   DR+ R T+ + ++R + LA  LL  GI  G+H+ I A N
Sbjct: 3   LGTLSSRSARYWPER--LAVIDRHTRLTFAQLEQRANQLASALLAQGIATGEHVAILAPN 60

Query: 68  VPDWLTFMFATAKIGVVLVTVNTAYKSHELAYVMKQSDMKALAIIDSFRDVNYLEILYEL 127
             + +    A  K G+V V VN      E+  V+  +   AL                  
Sbjct: 61  RAELVEAEVAFYKAGLVKVPVNARLAPDEVIQVLNDACSVAL------------------ 102

Query: 128 VPELKTSQRGKLNSEEFPYLKNVIYVGQEKHRGMYNTTELMLLGNYVSDEKLIEAKKGLD 187
           + + + +Q      +E P L+ ++ +G+   RG  + T   LL    S     +    L 
Sbjct: 103 IADAQLAQALLARRQEVPALRLIVTLGE---RGG-DITYAALLAQGSSQPISCD----LP 154

Query: 188 SDDVINMQYTSGTTGFPKGVMLT--HKNILNNGYYIGEKQKFTEEERLCLPVPLFHCFGI 245
            D +  + YTSG++G  K  ML+  ++  L         ++    + +    P+ H  G+
Sbjct: 155 DDALAVLHYTSGSSGVLKAAMLSVGNRKALIRKSLASPTRRAAPGDVMAHVGPITHASGM 214

Query: 246 VLGVLALLTHGGTLVMLEIFDPLLVLAAIQKEKCTAVYGVPTMFIAEFSHPMFEMFDLSS 305
            L  + LL  G   ++LE +D  L+L  IQ+E  T ++ VP M     + P  E +DLSS
Sbjct: 215 QL--MPLLAVGACNLLLERYDDQLLLETIQREGVTRLFLVPAMINRLVNFPDVERYDLSS 272

Query: 306 LRTGIMAGSTCPIEAMKKVMSDMYMREITISYGLTEASPVFTMTSVDDPF-----EKRVE 360
           LR  +M G+     A+ K   +++   +   YG  E   + T+ +  D        +R+ 
Sbjct: 273 LRL-VMYGAAPMAPALVKRAIEVFGPILAQGYGAGETCSLVTVLTEQDHLCEGGDYRRLA 331

Query: 361 SVGKAMPHCEVKIIDPETGETLAPGNVGEICCRGYNVMKGYYKMPEKTAEVIEKDGWLHS 420
           S G+     ++++++    + + PG VGEI  +G ++M+GY++ P  TAEV+ +DG+  +
Sbjct: 332 SCGRCYFETDLRVVNDHF-QDVQPGEVGEIVVKGPDIMQGYWRAPHLTAEVM-RDGYYLT 389

Query: 421 GDLAVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDEKYGEI 480
           GDLA  DE GY  IV R K+MII GG NIYP E+E+ LY+MP + +A VVG+PDE++GE 
Sbjct: 390 GDLATVDEQGYVFIVDRKKEMIISGGFNIYPSEVEQVLYSMPQVFEAAVVGVPDEQWGEA 449

Query: 481 VGAFVIPKEGYEIKEEDVRDFALEKIARYKVPKHVFVVEEFPMTASGKI 529
           V A ++ K G  ++E+DV +   + +A +K P+ V  V E P   +GK+
Sbjct: 450 VRAVIVLKPGMALQEQDVIEHCAQALAGFKKPRAVDFVSELPKNPNGKV 498