Pairwise Alignments

Query, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

Subject, 513 a.a., medium-chain fatty-acid--CoA ligase from Escherichia coli ECRC101

 Score =  241 bits (614), Expect = 6e-68
 Identities = 161/493 (32%), Positives = 255/493 (51%), Gaps = 35/493 (7%)

Query: 2   LFTNDTIGEFFEKQAQKDPDREFLVYPDRNLRFTYKEFDERTDLLAKGLLEIGIKKGDHI 61
           L+ + ++ +++++ A+  PD+   V  +    +TY   D     LA  +L  GI+ GD I
Sbjct: 20  LWGDASLADYWQQTARAMPDK-IAVVDNHGASYTYSALDHAASCLANWMLAKGIESGDRI 78

Query: 62  GIWARNVPDWLTFM---FATAKIGVVLVTVNTAYKSHELAYVMKQSDMKALAIIDSFRDV 118
              A  +P W  F     A  KIG V V +  +++  EL +V+ +   K       F+  
Sbjct: 79  ---AFQLPGWCEFTVIYLACLKIGAVSVPLLPSWREAELVWVLNKCQAKMFFTPTLFKQT 135

Query: 119 NYLEILYELVPELKTSQRGKLNSEEFPYLKNVIYVGQEKHRGMYNTTELMLLGNYVSDEK 178
             ++++  L  +L             P L+ ++ V +     +   T  + L   ++D  
Sbjct: 136 RPVDLILPLQNQL-------------PQLQQIVGVDK-----LAPATSSLSLSQIIADNT 177

Query: 179 LIEAKKGLDSDDVINMQYTSGTTGFPKGVMLTHKNILNNGYYIGEKQKFTEEERLCLPVP 238
            +        D++  + +TSGT G PKGVMLTH NIL +      +   T ++   +P P
Sbjct: 178 PLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAP 237

Query: 239 LFHCFGIVLGVLALLTHGGTLVMLEIFDPLLVLAAIQKEKCTAVYGVPTMFIAEFSHPMF 298
           L H  G + GV A    G   V+L+IF P   LA +++++C+ + G  T F+ +  + + 
Sbjct: 238 LGHATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCSCMLGA-TPFVYDLLNLLE 296

Query: 299 EM-FDLSSLRTGIMAGSTCPIEAMKKVMSDMYMREITIS--YGLTEASPVFTMTSVDDPF 355
           +   DLS+LR  +  G+T P    KKV  +   R I +   YG TE+SP   + ++DDP 
Sbjct: 297 KQPADLSALRFFLCGGTTIP----KKVARECQQRGIKLLSVYGSTESSP-HAVVNLDDPL 351

Query: 356 EKRVESVGKAMPHCEVKIIDPETGETLAPGNVGEICCRGYNVMKGYYKMPEKTAEVIEKD 415
            + + + G A    E+K++D +  +TL PG  GE   RG NV  GY+  PE TA  ++++
Sbjct: 352 SRFMHTDGYAAAGVEIKVVD-DARKTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEE 410

Query: 416 GWLHSGDLAVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDE 475
           GW +SGDL   DE GY KI GR KD+I+RGGENI  RE+E+ L   P I+DA VV +PDE
Sbjct: 411 GWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDE 470

Query: 476 KYGEIVGAFVIPK 488
           + GE   A+V+ K
Sbjct: 471 RLGERSCAYVVLK 483